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Zhiping Weng
Zhiping Weng
Prof & Director, Program in Bioinformatics and Integrative Biology, UMASS Medical School
Bestätigte E-Mail-Adresse bei umassmed.edu - Startseite
Titel
Zitiert von
Zitiert von
Jahr
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
136092012
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
59432007
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
ND Heintzman, RK Stuart, G Hon, Y Fu, CW Ching, RD Hawkins, ...
Nature genetics 39 (3), 311-318, 2007
38502007
The ENCODE (ENCyclopedia of DNA elements) project
EA Feingold, PJ Good, MS Guyer, S Kamholz, L Liefer, K Wetterstrand, ...
Science 306 (5696), 636-640, 2004
23232004
The TREM2-APOE pathway drives the transcriptional phenotype of dysfunctional microglia in neurodegenerative diseases
S Krasemann, C Madore, R Cialic, C Baufeld, N Calcagno, R El Fatimy, ...
Immunity 47 (3), 566-581. e9, 2017
19272017
High-resolution mapping and characterization of open chromatin across the genome
AP Boyle, S Davis, HP Shulha, P Meltzer, EH Margulies, Z Weng, ...
Cell 132 (2), 311-322, 2008
16782008
ZDOCK: an initial‐stage protein‐docking algorithm
R Chen, L Li, Z Weng
Proteins: Structure, Function, and Bioinformatics 52 (1), 80-87, 2003
16062003
Assessing computational tools for the discovery of transcription factor binding sites
M Tompa, N Li, TL Bailey, GM Church, B De Moor, E Eskin, AV Favorov, ...
Nature biotechnology 23 (1), 137-144, 2005
15972005
ZDOCK server: interactive docking prediction of protein–protein complexes and symmetric multimers
BG Pierce, K Wiehe, H Hwang, BH Kim, T Vreven, Z Weng
Bioinformatics 30 (12), 1771-1773, 2014
14842014
A global map of p53 transcription-factor binding sites in the human genome
CL Wei, Q Wu, VB Vega, KP Chiu, P Ng, T Zhang, A Shahab, HC Yong, ...
Cell 124 (1), 207-219, 2006
14332006
Paternally induced transgenerational environmental reprogramming of metabolic gene expression in mammals
BR Carone, L Fauquier, N Habib, JM Shea, CE Hart, R Li, C Bock, C Li, ...
Cell 143 (7), 1084-1096, 2010
12342010
Expanded encyclopaedias of DNA elements in the human and mouse genomes
JE Moore, MJ Purcaro, HE Pratt, CB Epstein, N Shoresh, J Adrian, T Kawli, ...
Nature 583 (7818), 699-710, 2020
10752020
Sequence features and chromatin structure around the genomic regions bound by 119 human transcription factors
J Wang, J Zhuang, S Iyer, XY Lin, TW Whitfield, MC Greven, BG Pierce, ...
Genome research 22 (9), 1798-1812, 2012
10442012
Therapeutic genome editing by combined viral and non-viral delivery of CRISPR system components in vivo
H Yin, CQ Song, JR Dorkin, LJ Zhu, Y Li, Q Wu, A Park, J Yang, S Suresh, ...
Nature biotechnology 34 (3), 328-333, 2016
9032016
Defining functional DNA elements in the human genome
M Kellis, B Wold, MP Snyder, BE Bernstein, A Kundaje, GK Marinov, ...
Proceedings of the National Academy of Sciences 111 (17), 6131-6138, 2014
8532014
Endogenous siRNAs derived from transposons and mRNAs in Drosophila somatic cells
M Ghildiyal, H Seitz, MD Horwich, C Li, T Du, S Lee, J Xu, ELW Kittler, ...
Science 320 (5879), 1077-1081, 2008
7962008
Comprehensive functional genomic resource and integrative model for the human brain
D Wang, S Liu, J Warrell, H Won, X Shi, FCP Navarro, D Clarke, M Gu, ...
Science 362 (6420), eaat8464, 2018
7842018
Unsupervised pattern discovery in human chromatin structure through genomic segmentation
MM Hoffman, OJ Buske, J Wang, Z Weng, JA Bilmes, WS Noble
Nature methods 9 (5), 473-476, 2012
7072012
Target RNA–directed trimming and tailing of small silencing RNAs
SL Ameres, MD Horwich, JH Hung, J Xu, M Ghildiyal, Z Weng, PD Zamore
Science 328 (5985), 1534-1539, 2010
6792010
Global mapping of c-Myc binding sites and target gene networks in human B cells
KI Zeller, XD Zhao, CWH Lee, KP Chiu, F Yao, JT Yustein, HS Ooi, ...
Proceedings of the National Academy of Sciences 103 (47), 17834-17839, 2006
6402006
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