Bryan Kolaczkowski
Bryan Kolaczkowski
Unknown affiliation
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Cited by
Cited by
Performance of maximum parsimony and likelihood phylogenetics when evolution is heterogeneous
B Kolaczkowski, JW Thornton
Nature 431 (7011), 980-984, 2004
Genomic Variation in Natural Populations of Drosophila melanogaster
CH Langley, K Stevens, C Cardeno, YCG Lee, DR Schrider, JE Pool, ...
Genetics 192 (2), 533-598, 2012
Bacteroides dorei dominates gut microbiome prior to autoimmunity in Finnish children at high risk for type 1 diabetes
AG Davis-Richardson, AN Ardissone, R Dias, V Simell, MT Leonard, ...
Frontiers in microbiology 5, 678, 2014
Genomic Differentiation Between Temperate and Tropical Australian Populations of Drosophila melanogaster
B Kolaczkowski, AD Kern, AK Holloway, DJ Begun
Genetics 187 (1), 245-260, 2011
Robustness of ancestral sequence reconstruction to phylogenetic uncertainty
V Hanson-Smith, B Kolaczkowski, JW Thornton
Molecular biology and evolution 27 (9), 1988-1999, 2010
Compromised gut microbiota networks in children with anti-islet cell autoimmunity
D Endesfelder, W zu Castell, A Ardissone, AG Davis-Richardson, ...
Diabetes 63 (6), 2006-2014, 2014
Evolution of animal and plant dicers: early parallel duplications and recurrent adaptation of antiviral RNA binding in plants
K Mukherjee, H Campos, B Kolaczkowski
Molecular Biology and Evolution 30 (3), 627-641, 2013
Parallel Geographic Variation in Drosophila melanogaster
JA Reinhardt, B Kolaczkowski, CD Jones, DJ Begun, AD Kern
Genetics 197 (1), 361-373, 2014
Long-branch attraction bias and inconsistency in Bayesian phylogenetics
B Kolaczkowski, JW Thornton
PloS one 4 (12), e7891, 2009
A mixed branch length model of heterotachy improves phylogenetic accuracy
B Kolaczkowski, JW Thornton
Molecular biology and evolution 25 (6), 1054-1066, 2008
Recurrent Adaptation in RNA Interference Genes Across the Drosophila Phylogeny
B Kolaczkowski, DN Hupalo, AD Kern
Molecular biology and evolution 28 (2), 1033-1042, 2011
Genomic targets and features of BarA-UvrY (-SirA) signal transduction systems
TR Zere, CA Vakulskas, Y Leng, A Pannuri, AH Potts, R Dias, D Tang, ...
PLoS One 10 (12), e0145035, 2015
Functional annotations of paralogs: a blessing and a curse
R Zallot, KJ Harrison, B Kolaczkowski, V de Crécy-Lagard
Life 6 (3), 39, 2016
Effects of branch length uncertainty on Bayesian posterior probabilities for phylogenetic hypotheses
B Kolaczkowski, JW Thornton
Molecular biology and evolution 24 (9), 2108-2118, 2007
Ancient origins of vertebrate-specific innate antiviral immunity
K Mukherjee, B Korithoski, B Kolaczkowski
Molecular biology and evolution 31 (1), 140-153, 2014
INTREPID: a web server for prediction of functionally important residues by evolutionary analysis
S Sankararaman, B Kolaczkowski, K Sjölander
Nucleic acids research 37 (suppl_2), W390-W395, 2009
Reconstructing the evolutionary history of nitrogenases: Evidence for ancestral molybdenum‐cofactor utilization
AK Garcia, H McShea, B Kolaczkowski, B Kaçar
Geobiology 18 (3), 394-411, 2020
Multiple Recombination Events Drive the Current Genetic Structure of Xanthomonas perforans in Florida
S Timilsina, JA Pereira-Martin, GV Minsavage, F Iruegas-Bocardo, ...
Frontiers in microbiology 10, 448, 2019
Dicer cleaves 5′-extended microRNA precursors originating from RNA polymerase II transcription start sites
P Sheng, C Fields, K Aadland, T Wei, O Kolaczkowski, T Gu, ...
Nucleic acids research 46 (11), 5737-5752, 2018
Is there a star tree paradox?
B Kolaczkowski, JW Thornton
Molecular Biology and Evolution 23 (10), 1819-1823, 2006
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