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Simone Leo
Simone Leo
Researcher, CRS4
Verified email at crs4.it
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Cited by
Cited by
Year
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
E Afgan, D Baker, B Batut, M Van Den Beek, D Bouvier, M Čech, J Chilton, ...
Nucleic acids research 46 (W1), W537-W544, 2018
37082018
Lentiviral hematopoietic stem cell gene therapy benefits metachromatic leukodystrophy
A Biffi, E Montini, L Lorioli, M Cesani, F Fumagalli, T Plati, C Baldoli, ...
Science 341 (6148), 1233158, 2013
13322013
OMERO: flexible, model-driven data management for experimental biology
C Allan, JM Burel, J Moore, C Blackburn, M Linkert, S Loynton, ...
Nature methods 9 (3), 245-253, 2012
5622012
Image Data Resource: a bioimage data integration and publication platform
E Williams, J Moore, SW Li, G Rustici, A Tarkowska, A Chessel, S Leo, ...
Nature methods 14 (8), 775-781, 2017
2552017
SEAL: a distributed short read mapping and duplicate removal tool
L Pireddu, S Leo, G Zanetti
Bioinformatics 27 (15), 2159-2160, 2011
1802011
Biodoop: bioinformatics on hadoop
S Leo, F Santoni, G Zanetti
2009 International Conference on Parallel Processing Workshops, 415-422, 2009
1042009
Packaging research artefacts with RO-Crate
S Soiland-Reyes, P Sefton, M Crosas, LJ Castro, F Coppens, ...
Data Science 5 (2), 97-138, 2022
772022
Pydoop: a python mapreduce and hdfs api for hadoop
S Leo, G Zanetti
Proceedings of the 19th ACM International Symposium on High Performance …, 2010
682010
Parallelizing bioinformatics applications with MapReduce
M Gaggero, S Leo, S Manca, F Santoni, O Schiaratura, G Zanetti, E CRS, ...
Cloud Computing and Its Applications 12 (18), 22-23, 2008
522008
Implementing FAIR digital objects in the EOSC-Life workflow collaboratory
C Goble, S Soiland-Reyes, F Bacall, S Owen, A Williams, I Eguinoa, ...
Zenodo, 2021
492021
Suspending, migrating and resuming HPC virtual clusters
P Anedda, S Leo, S Manca, M Gaggero, G Zanetti
Future Generation Computer Systems 26 (8), 1063-1072, 2010
382010
VISPA: a computational pipeline for the identification and analysis of genomic vector integration sites
A Calabria, S Leo, F Benedicenti, D Cesana, G Spinozzi, M Orsini, ...
Genome Medicine 6 (9), 67, 2014
342014
MapReducing a genomic sequencing workflow
L Pireddu, S Leo, G Zanetti
Proceedings of the second international workshop on MapReduce and its …, 2011
322011
OpenEHR modeling for genomics in clinical practice
C Mascia, P Uva, S Leo, G Zanetti
International Journal of Medical Informatics 120, 147-156, 2018
282018
The deephealth toolkit: a unified framework to boost biomedical applications
M Cancilla, L Canalini, F Bolelli, S Allegretti, S Carrión, R Paredes, ...
2020 25th International Conference on Pattern Recognition (ICPR), 9881-9888, 2021
212021
Community standards for open cell migration data
AN Gonzalez-Beltran, P Masuzzo, C Ampe, GJ Bakker, S Besson, RH Eibl, ...
GigaScience 9 (5), giaa041, 2020
202020
BioBlend. objects: metacomputing with Galaxy
S Leo, L Pireddu, G Cuccuru, L Lianas, N Soranzo, E Afgan, G Zanetti
Bioinformatics 30 (19), 2816-2817, 2014
162014
An automated infrastructure to support high-throughput bioinformatics
G Cuccuru, S Leo, L Lianas, M Muggiri, A Pinna, L Pireddu, P Uva, ...
2014 International Conference on High Performance Computing & Simulation …, 2014
132014
A Hadoop-Galaxy adapter for user-friendly and scalable data-intensive bioinformatics in Galaxy
L Pireddu, S Leo, N Soranzo, G Zanetti
Proceedings of the 5th ACM Conference on Bioinformatics, Computational …, 2014
122014
Integration Site Analysis in a Clinical Trial of Lentiviral Vector Based Hematopoietic Stem Cell Gene Therapy for Metachromatic Leukodystrophy. An 18 Months Follow-up
E Montini, A Biffi, A Calabria, L Biasco, M Cesani, F Benedicenti, T Plati, ...
Molecular Therapy 21 (S1), S119, 2013
92013
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