| Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection BF Keele, EE Giorgi, JF Salazar-Gonzalez, JM Decker, KT Pham, ... Proceedings of the National Academy of Sciences 105 (21), 7552-7557, 2008 | 2311 | 2008 |
| Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing JF Salazar-Gonzalez, E Bailes, KT Pham, MG Salazar, MB Guffey, ... Journal of virology 82 (8), 3952-3970, 2008 | 691 | 2008 |
| Quantitating the multiplicity of infection with human immunodeficiency virus type 1 subtype C reveals a non-poisson distribution of transmitted variants MR Abrahams, JA Anderson, EE Giorgi, C Seoighe, K Mlisana, LH Ping, ... Journal of virology 83 (8), 3556-3567, 2009 | 493 | 2009 |
| HIV sequence compendium 2001 C Kuiken, B Foley, B Hahn, P Marx, F McCutchan, J Mellors, S Wolinsky, ... Theoretical Biology and Biophysics Group, Los Alamos National Laboratory …, 2001 | 282 | 2001 |
| Modeling sequence evolution in acute HIV-1 infection HY Lee, EE Giorgi, BF Keele, B Gaschen, GS Athreya, ... Journal of theoretical biology 261 (2), 341-360, 2009 | 225 | 2009 |
| Unequal evolutionary rates in the human immunodeficiency virus type 1 (HIV-1) pandemic: the evolutionary rate of HIV-1 slows down when the epidemic rate increases IM Berry, R Ribeiro, M Kothari, G Athreya, M Daniels, HY Lee, W Bruno, ... Journal of virology 81 (19), 10625-10635, 2007 | 114 | 2007 |
| Estimating time since infection in early homogeneous HIV-1 samples using a poisson model EE Giorgi, B Funkhouser, G Athreya, AS Perelson, BT Korber, ... BMC bioinformatics 11, 1-7, 2010 | 108 | 2010 |
| Tracking HIV-1 recombination to resolve its contribution to HIV-1 evolution in natural infection H Song, EE Giorgi, VV Ganusov, F Cai, G Athreya, H Yoon, O Carja, ... Nature communications 9 (1), 1928, 2018 | 99 | 2018 |
| A multiple-alignment based primer design algorithm for genetically highly variable DNA targets J Brodin, M Krishnamoorthy, G Athreya, W Fischer, P Hraber, C Gleasner, ... BMC bioinformatics 14, 1-9, 2013 | 51 | 2013 |
| The evolutionary rate dynamically tracks changes in HIV-1 epidemics: application of a simple method for optimizing the evolutionary rate in phylogenetic trees with longitudinal … IM Berry, G Athreya, M Kothari, M Daniels, WJ Bruno, B Korber, C Kuiken, ... Epidemics 1 (4), 230-239, 2009 | 28 | 2009 |
| Quantitating the multiplicity of infection with HIV-1 subtype C reveals a non-Poisson distribution of transmitted variants MR Abrahams, JA Anderson, EE Giorgi, C Seoighe, K Mlisana, LH Ping, ... J Virol 83 (8), 3556-3567, 2009 | 8 | 2009 |
| WITHDRAWN: The evolutionary rate dynamically tracks changes in HIV-1 epidemics: Application of a simple method for optimizing the evolutionary rate in phylogenetic trees with … IM Berry, G Athreya, M Kothari, M Daniels, WJ Bruno, B Korber, C Kuiken, ... Epidemics, 2009 | | 2009 |
Bette KorberLos Alamos National LaboratoryVerified email at lanl.gov
