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David Lähnemann
David Lähnemann
Other namesDavid Laehnemann, David Lahnemann
University of Duisburg-Essen
Verified email at hhu.de - Homepage
Title
Cited by
Cited by
Year
Eleven grand challenges in single-cell data science
D Lähnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ...
Genome biology 21, 1-35, 2020
9232020
Bioconda: sustainable and comprehensive software distribution for the life sciences
B Grüning, R Dale, A Sjödin, BA Chapman, J Rowe, CH Tomkins-Tinch, ...
Nature methods 15 (7), 475-476, 2018
7892018
Denoising DNA deep sequencing data—high-throughput sequencing errors and their correction
D Laehnemann, A Borkhardt, AC McHardy
Briefings in bioinformatics 17 (1), 154-179, 2016
3212016
When the most potent combination of antibiotics selects for the greatest bacterial load: the smile-frown transition
R Pena-Miller, D Laehnemann, G Jansen, A Fuentes-Hernandez, ...
PLoS biology 11 (4), e1001540, 2013
2412013
Five percent of healthy newborns have an ETV6-RUNX1 fusion as revealed by DNA-based GIPFEL screening
D Schäfer, M Olsen, D Lähnemann, M Stanulla, R Slany, K Schmiegelow, ...
Blood, The Journal of the American Society of Hematology 131 (7), 821-826, 2018
1062018
Host–Pathogen Coevolution: The Selective Advantage of Bacillus thuringiensis Virulence and Its Cry Toxin Genes
L Masri, A Branca, AE Sheppard, A Papkou, D Laehnemann, ...
PLoS biology 13 (6), e1002169, 2015
812015
Genomics of rapid adaptation to antibiotics: convergent evolution and scalable sequence amplification
D Laehnemann, R Peña-Miller, P Rosenstiel, R Beardmore, G Jansen, ...
Genome biology and evolution 6 (6), 1287-1301, 2014
672014
The optimal deployment of synergistic antibiotics: a control-theoretic approach
R Peña-Miller, D Lähnemann, H Schulenburg, M Ackermann, ...
Journal of The Royal Society Interface 9 (75), 2488-2502, 2012
242012
Selecting against antibiotic-resistant pathogens: optimal treatments in the presence of commensal bacteria
R Peña-Miller, D Lähnemann, H Schulenburg, M Ackermann, ...
Bulletin of mathematical biology 74, 908-934, 2012
212012
Accurate and scalable variant calling from single cell DNA sequencing data with ProSolo
D Lähnemann, J Köster, U Fischer, A Borkhardt, AC McHardy, ...
Nature communications 12 (1), 6744, 2021
92021
12 Grand challenges in single-cell data science
D Laehnemann, J Köster, E Szczurek, DJ McCarthy, SC Hicks, ...
PeerJ Preprints, 2019
92019
ProSolo: Accurate variant calling from single cell DNA sequencing data
D Lähnemann, J Köster, U Fischer, A Borkhardt, AC McHardy, ...
bioRxiv, 2020.04. 27.064071, 2020
42020
Insane in the vembrane: filtering and transforming VCF/BCF files
T Hartmann, C Schröder, E Kuthe, D Lähnemann, J Köster
Bioinformatics 39 (1), btac810, 2023
12023
Scientific Software-the role of best practices and recommendations
B Fritzsch, E Bernstein, W Castell, M Diesmann, H Haas, M Hammitzsch, ...
EGU General Assembly Conference Abstracts, 3294, 2017
12017
Helmholtz Open Science Workshop „Zugang zu und Nachnutzung von wissenschaftlicher Software “# hgfos16
KS Scheliga, H Pampel, E Bernstein, C Bruch, W zu Castell, M Diesmann, ...
Helmholtz-Gemeinschaft, 2017
12017
Pancreatic cancer acquires resistance to MAPK pathway inhibition by clonal expansion and adaptive DNA hypermethylation
LK Godfrey, J Forster, ST Liffers, C Schröder, J Köster, L Henschel, ...
Clinical Epigenetics 16 (1), 13, 2024
2024
Microphaser-a small-scale phasing approach for improved personalized neopeptidome creation
J Forster, D Lähnemann, A Paschen, A Schramm, M Schuler, J Köster
bioRxiv, 2021.08. 11.455827, 2021
2021
Helmholtz Open Science Workshop „Zugang zu und Nachnutzung von wissenschaftlicher Software “# hgfos16: Report; November 2016
KS Scheliga, H Pampel, E Bernstein, C Bruch, W zu Castell, M Diesmann, ...
Deutsches GeoForschungsZentrum GFZ, 2017
2017
Genomics of Rapid Adaptation to Antibiotics: Convergent Evolution and Scalable Sequence Amplification
D Laehnemann, R Pena-Miller, P Rosenstiel, R Beardmore, G Jansen, ...
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