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Yuliya Karpievitch
Yuliya Karpievitch
AI & Data Analyst, Biostatistician
Bestätigte E-Mail-Adresse bei telethonkids.org.au - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Normalization and missing value imputation for label-free LC-MS analysis
YV Karpievitch, AR Dabney, RD Smith
BMC bioinformatics 13 (16), 1-9, 2012
2742012
A statistical framework for protein quantitation in bottom-up MS-based proteomics
Y Karpievitch, J Stanley, T Taverner, J Huang, JN Adkins, C Ansong, ...
Bioinformatics 25 (16), 2028-2034, 2009
1782009
Liquid chromatography mass spectrometry-based proteomics: biological and technological aspects
YV Karpievitch, AD Polpitiya, GA Anderson, RD Smith, AR Dabney
The annals of applied statistics 4 (4), 1797, 2010
1672010
Population scale mapping of transposable element diversity reveals links to gene regulation and epigenomic variation
T Stuart, SR Eichten, J Cahn, YV Karpievitch, JO Borevitz, R Lister
elife 5, 2016
1512016
DanteR: an extensible R-based tool for quantitative analysis of-omics data
T Taverner, YV Karpievitch, AD Polpitiya, JN Brown, AR Dabney, ...
Bioinformatics 28 (18), 2404-2406, 2012
1372012
Label-free quantitative LC–MS proteomics of Alzheimer’s disease and normally aged human brains
VP Andreev, VA Petyuk, HM Brewer, YV Karpievitch, F Xie, J Clarke, ...
Journal of proteome research 11 (6), 3053-3067, 2012
1272012
Extensive transcriptomic and epigenomic remodelling occurs during Arabidopsis thaliana germination
R Narsai, Q Gouil, D Secco, A Srivastava, YV Karpievitch, LC Liew, ...
Genome biology 18 (1), 1-18, 2017
1162017
Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition
YV Karpievitch, T Taverner, JN Adkins, SJ Callister, GA Anderson, ...
Bioinformatics 25 (19), 2573-2580, 2009
922009
Metabolomics data normalization with EigenMS
YV Karpievitch, SB Nikolic, R Wilson, JE Sharman, LM Edwards
PloS one 9 (12), e116221, 2014
852014
An introspective comparison of random forest-based classifiers for the analysis of cluster-correlated data by way of RF++
YV Karpievitch, EG Hill, AP Leclerc, AR Dabney, JS Almeida
PloS one 4 (9), e7087, 2009
682009
Short-and long-term benefits for forest biodiversity of retaining unlogged patches in harvested areas
SC Baker, CB Halpern, TJ Wardlaw, RL Crawford, RE Bigley, GJ Edgar, ...
Forest Ecology and Management 353, 187-195, 2015
572015
A statistical method for assessing peptide identification confidence in accurate mass and time tag proteomics
JR Stanley, JN Adkins, GW Slysz, ME Monroe, SO Purvine, ...
Analytical chemistry 83 (16), 6135-6140, 2011
512011
PrepMS: TOF MS data graphical preprocessing tool
YV Karpievitch, EG Hill, AJ Smolka, JS Morris, KR Coombes, KA Baggerly, ...
Bioinformatics 23 (2), 264-265, 2007
512007
Aspergillus Infections and Progression of Structural Lung Disease in Children with Cystic Fibrosis
O Breuer, A Schultz, LW Garratt, L Turkovic, T Rosenow, CP Murray, ...
American Journal of Respiratory and Critical Care Medicine 201 (6), 688-696, 2020
372020
Novel elements of the chondrocyte stress response identified using an in vitro model of mouse cartilage degradation
R Wilson, SB Golub, L Rowley, C Angelucci, YV Karpievitch, JF Bateman, ...
Journal of proteome research 15 (3), 1033-1050, 2016
272016
HOME: a histogram based machine learning approach for effective identification of differentially methylated regions
A Srivastava, YV Karpievitch, SR Eichten, JO Borevitz, R Lister
BMC bioinformatics 20 (1), 1-15, 2019
222019
Evaluating abundance trends of iconic species using local ecological knowledge
C Peñaherrera-Palma, I van Putten, YV Karpievitch, S Frusher, ...
Biological Conservation 225, 197-207, 2018
212018
mGrid: A load-balanced distributed computing environment for the remote execution of the user-defined Matlab code
YV Karpievitch, JS Almeida
BMC bioinformatics 7 (1), 1-12, 2006
112006
Aberrant cell migration contributes to defective airway epithelial repair in childhood wheeze
T Iosifidis, EN Sutanto, AG Buckley, L Coleman, EE Gill, AH Lee, KM Ling, ...
JCI insight 5 (7), 2020
102020
Serum metabolic profile predicts adverse central haemodynamics in patients with type 2 diabetes mellitus
SB Nikolic, LM Edwards, YV Karpievitch, R Wilson, J Horne, MJ Adams, ...
Acta diabetologica 53 (3), 367-375, 2016
82016
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