Genome-wide mapping of alternative splicing in Arabidopsis thaliana SA Filichkin, HD Priest, SA Givan, R Shen, DW Bryant, SE Fox, WK Wong, ... Genome research 20 (1), 45-58, 2010 | 1018 | 2010 |
Network discovery pipeline elucidates conserved time-of-day–specific cis-regulatory modules TP Michael, TC Mockler, G Breton, C McEntee, A Byer, JD Trout, ... PLoS genetics 4 (2), e14, 2008 | 574 | 2008 |
Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology R Cronn, A Liston, M Parks, DS Gernandt, R Shen, T Mockler Nucleic acids research 36 (19), e122-e122, 2008 | 512 | 2008 |
The DIURNAL project: DIURNAL and circadian expression profiling, model-based pattern matching, and promoter analysis TC Mockler, TP Michael, HD Priest, R Shen, CM Sullivan, SA Givan, ... Cold Spring Harbor symposia on quantitative biology 72, 353-363, 2007 | 424 | 2007 |
AML suppresses hematopoiesis by releasing exosomes that contain microRNAs targeting c-MYB NI Hornick, B Doron, S Abdelhamed, J Huan, CA Harrington, R Shen, ... Science signaling 9 (444), ra88-ra88, 2016 | 157 | 2016 |
miR-218 is essential to establish motor neuron fate as a downstream effector of Isl1–Lhx3 KP Thiebes, H Nam, XA Cambronne, R Shen, SM Glasgow, HH Cho, ... Nature communications 6 (1), 7718, 2015 | 89 | 2015 |
Fusion protein Isl1–Lhx3 specifies motor neuron fate by inducing motor neuron genes and concomitantly suppressing the interneuron programs S Lee, JM Cuvillier, B Lee, R Shen, JW Lee, SK Lee Proceedings of the National Academy of Sciences 109 (9), 3383-3388, 2012 | 83 | 2012 |
Capturing microRNA targets using an RNA-induced silencing complex (RISC)-trap approach XA Cambronne, R Shen, PL Auer, RH Goodman Proceedings of the National Academy of Sciences 109 (50), 20473-20478, 2012 | 67 | 2012 |
Supersplat—spliced RNA-seq alignment DW Bryant Jr, R Shen, HD Priest, WK Wong, TC Mockler Bioinformatics 26 (12), 1500-1505, 2010 | 64 | 2010 |
Crucial roles of mixed‐lineage leukemia 3 and 4 as epigenetic switches of the hepatic circadian clock controlling bile acid homeostasis in mice DH Kim, JC Rhee, S Yeo, R Shen, SK Lee, JW Lee, S Lee Hepatology 61 (3), 1012-1023, 2015 | 48 | 2015 |
STAT3 promotes motor neuron differentiation by collaborating with motor neuron-specific LIM complex S Lee, R Shen, HH Cho, RJ Kwon, SY Seo, JW Lee, SK Lee Proceedings of the National Academy of Sciences 110 (28), 11445-11450, 2013 | 42 | 2013 |
Adenylate kinase of Escherichia coli, a component of the phage T4 dNTP synthetase complex JH Kim, R Shen, MC Olcott, I Rajagopal, CK Mathews Journal of Biological Chemistry 280 (31), 28221-28229, 2005 | 26 | 2005 |
Protein–DNA interactions in the T4 dNTP synthetase complex dependent on gene 32 single‐stranded DNA‐binding protein JH Kim, LJ Wheeler, R Shen, CK Mathews Molecular microbiology 55 (5), 1502-1514, 2005 | 24 | 2005 |
Transcriptional profiling of newly generated dentate granule cells using TU tagging reveals pattern shifts in gene expression during circuit integration C Chatzi, Y Zhang, R Shen, GL Westbrook, RH Goodman Eneuro 3 (1), 2016 | 21 | 2016 |
Molecular interactions involving Escherichia coli nucleoside diphosphate kinase R Shen, LJ Wheeler, CK Mathews Journal of bioenergetics and biomembranes 38, 255-259, 2006 | 21 | 2006 |
Escherichia coli nucleoside diphosphate kinase interactions with T4 phage proteins of deoxyribonucleotide synthesis and possible regulatory functions R Shen, MC Olcott, JH Kim, I Rajagopal, CK Mathews Journal of Biological Chemistry 279 (31), 32225-32232, 2004 | 20 | 2004 |
Discovery of SNP markers in expressed genes of hazelnut ER Rowley, HD Priest, R Shen, WK Wong, TC Mockler, DW Bryant, ... International Symposium on Molecular Markers in Horticulture 859, 289-294, 2009 | 8 | 2009 |
Correction: Corrigendum: miR-218 is essential to establish motor neuron fate as a downstream effector of Isl1–Lhx3 KP Thiebes, H Nam, XA Cambronne, R Shen, SM Glasgow, HH Cho, ... Nature communications 6 (1), 8227, 2015 | 7 | 2015 |
Transcriptome analysis of ciliary-dependent MCH signaling in differentiating 3T3-L1 pre-adipocytes LB Cook, HD Ophardt, R Shen, BH Pratt, LA Galbier Scientific Reports 11 (1), 4880, 2021 | 5 | 2021 |
Identification of Long non-coding RNAs expressed during early adipogenesis R Shen, RA Soeder, HD Ophardt, PJ Giangrasso, LB Cook OnLine Journal of Biological Sciences 19 (4), 2019 | 2 | 2019 |