Alison E Mather
Alison E Mather
Quadram Institute
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A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic
MTG Holden, LY Hsu, K Kurt, LA Weinert, AE Mather, SR Harris, ...
Genome research 23 (4), 653-664, 2013
Phylogeographical analysis of the dominant multidrug-resistant H58 clade of Salmonella Typhi identifies inter-and intracontinental transmission events
VK Wong, S Baker, DJ Pickard, J Parkhill, AJ Page, NA Feasey, ...
Nature genetics 47 (6), 632-639, 2015
Dense genomic sampling identifies highways of pneumococcal recombination
C Chewapreecha, SR Harris, NJ Croucher, C Turner, P Marttinen, ...
Nature genetics 46 (3), 305-309, 2014
Evaluating the effects of SARS-CoV-2 Spike mutation D614G on transmissibility and pathogenicity
E Volz, V Hill, JT McCrone, A Price, D Jorgensen, Á O’Toole, J Southgate, ...
Cell, 2020
Distinguishable epidemics of multidrug-resistant Salmonella Typhimurium DT104 in different hosts
AE Mather, SWJ Reid, DJ Maskell, J Parkhill, MC Fookes, SR Harris, ...
Science 341 (6153), 1514-1517, 2013
ARIBA: rapid antimicrobial resistance genotyping directly from sequencing reads
M Hunt, AE Mather, L Sánchez-Busó, AJ Page, J Parkhill, JA Keane, ...
Microbial genomics 3 (10), 2017
Comprehensive identification of single nucleotide polymorphisms associated with beta-lactam resistance within pneumococcal mosaic genes
C Chewapreecha, P Marttinen, NJ Croucher, SJ Salter, SR Harris, ...
PLoS Genet 10 (8), e1004547, 2014
Distinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings
NA Feasey, J Hadfield, KH Keddy, TJ Dallman, J Jacobs, X Deng, ...
Nature Genetics, 2016
Microevolution of Monophasic Salmonella Typhimurium during Epidemic, United Kingdom, 2005–2010
L Petrovska, AE Mather, M AbuOun, P Branchu, SR Harris, T Connor, ...
Emerging infectious diseases 22 (4), 617, 2016
A current perspective on antimicrobial resistance in Southeast Asia
RM Zellweger, J Carrique-Mas, D Limmathurotsakul, NPJ Day, ...
Journal of Antimicrobial Chemotherapy 72 (11), 2963-2972, 2017
Global and regional dissemination and evolution of Burkholderia pseudomallei
C Chewapreecha, MTG Holden, M Vehkala, N Välimäki, Z Yang, ...
Nature Microbiology 2, 16263, 2017
An extended genotyping framework for Salmonella enterica serovar Typhi, the cause of human typhoid
VK Wong, S Baker, TR Connor, D Pickard, AJ Page, J Dave, N Murphy, ...
Nature communications 7, ncomms12827, 2016
The effect of genetic structure on molecular dating and tests for temporal signal
GGR Murray, F Wang, EM Harrison, GK Paterson, AE Mather, SR Harris, ...
Methods in Ecology and Evolution 7 (1), 80-89, 2016
Integrated view of Vibrio cholerae in the Americas
D Domman, ML Quilici, MJ Dorman, E Njamkepo, A Mutreja, AE Mather, ...
Science 358 (6364), 789-793, 2017
An ecological approach to assessing the epidemiology of antimicrobial resistance in animal and human populations
AE Mather, L Matthews, DJ Mellor, R Reeve, MJ Denwood, P Boerlin, ...
Proceedings of the Royal Society B: Biological Sciences, rspb20111975, 2011
Global phylogeography and evolutionary history of Shigella dysenteriae type 1
E Njamkepo, N Fawal, A Tran-Dien, J Hawkey, N Strockbine, C Jenkins, ...
Nature Microbiology 1, 16027, 2016
Salmonella enterica serotype 4,[5], 12: i:-in swine in the United States Midwest: an emerging multidrug resistant clone
E Elnekave, S Hong, AE Mather, D Boxrud, AJ Taylor, V Lappi, ...
Clinical Infectious Diseases, 2017
A multi-country outbreak of Salmonella Newport gastroenteritis in Europe associated with watermelon from Brazil, confirmed by whole genome sequencing: October 2011 to January 2012
L Byrne, I Fisher, T Peters, A Mather, N Thomson, B Rosner, H Bernard, ...
Euro surveillance: bulletin Europeen sur les maladies transmissibles …, 2014
Invasive Non-typhoidal Salmonella Infections in Asia: Clinical Observations, Disease Outcome and Dominant Serovars from an Infectious Disease Hospital in Vietnam
NPH Lan, TLT Phuong, HN Huu, L Thuy, AE Mather, SE Park, F Marks, ...
PLOS Negl Trop Dis 10 (8), e0004857, 2016
Risk factors for hide contamination of Scottish cattle at slaughter with Escherichia coli O157
AE Mather, GT Innocent, SA McEwen, WJ Reilly, DJ Taylor, WB Steele, ...
Preventive veterinary medicine 80 (4), 257-270, 2007
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