| Dynamics of transcription factor binding site evolution M Tuğrul, T Paixao, NH Barton, G Tkačik PLoS genetics 11 (11), e1005639, 2015 | 103 | 2015 |
| When three is not a crowd: a Crossregulation Model of the dynamics and repertoire selection of regulatory CD4+ T cells J Carneiro, K Leon, Í Caramalho, C Van Den Dool, R Gardner, V Oliveira, ... Immunological reviews 216 (1), 48-68, 2007 | 101 | 2007 |
| Immunological self-tolerance: Lessons from mathematical modeling J Carneiro, T Paixão, D Milutinovic, J Sousa, K Leon, R Gardner, J Faro Journal of Computational and Applied Mathematics 184 (1), 77-100, 2005 | 70 | 2005 |
| Stochastic monoallelic expression of IL-10 in T cells DP Calado, T Paixao, D Holmberg, M Haury The Journal of Immunology 177 (8), 5358-5364, 2006 | 64 | 2006 |
| The effect of gene interactions on the long-term response to selection T Paixão, NH Barton Proceedings of the National Academy of Sciences 113 (16), 4422-4427, 2016 | 55 | 2016 |
| Towards a runtime comparison of natural and artificial evolution T Paixão, J Pérez Heredia, D Sudholt, B Trubenová Algorithmica 78, 681-713, 2017 | 42 | 2017 |
| Automated knee osteoarthritis assessment increases physicians’ agreement rate and accuracy: data from the osteoarthritis initiative S Nehrer, R Ljuhar, P Steindl, R Simon, D Maurer, D Ljuhar, Z Bertalan, ... Cartilage 13 (1_suppl), 957S-965S, 2021 | 41 | 2021 |
| How to escape local optima in black box optimisation: when non-elitism outperforms elitism PS Oliveto, T Paixão, J Pérez Heredia, D Sudholt, B Trubenová Algorithmica 80, 1604-1633, 2018 | 39 | 2018 |
| Within-host competition selects for plasmid-encoded toxin–antitoxin systems TF Cooper, T Paixão, JA Heinemann Proceedings of the Royal Society B: Biological Sciences 277 (1697), 3149-3155, 2010 | 37 | 2010 |
| On the mechanistic nature of epistasis in a canonical cis-regulatory element M Lagator, T Paixao, NH Barton, JP Bollback, CC Guet Elife 6, e25192, 2017 | 33 | 2017 |
| Toward a unifying framework for evolutionary processes T Paixão, G Badkobeh, N Barton, D Çörüş, DC Dang, T Friedrich, ... Journal of Theoretical Biology 383, 28-43, 2015 | 32 | 2015 |
| Redundancy and the Evolution of Cis-Regulatory Element Multiplicity T Paixão, RBR Azevedo PLoS computational biology 6 (7), e1000848, 2010 | 31 | 2010 |
| A novel quantitative metric for joint space width: data from the Osteoarthritis Initiative (OAI) T Paixao, MD DiFranco, R Ljuhar, D Ljuhar, C Goetz, Z Bertalan, ... Osteoarthritis and Cartilage 28 (8), 1055-1061, 2020 | 27 | 2020 |
| Stress-induced mutagenesis: Stress diversity facilitates the persistence of mutator genes M Lukačišinová, S Novak, T Paixão PLoS computational biology 13 (7), e1005609, 2017 | 27 | 2017 |
| Accumulation of Spontaneous Mutations in the Ciliate Tetrahymena thermophila HA Long, T Paixão, RBR Azevedo, RA Zufall Genetics 195 (2), 527-540, 2013 | 25 | 2013 |
| Quantitative insights into stochastic monoallelic expression of cytokine genes T Paixao, TP Carvalho, DP Calado, J Carneiro Immunology and cell biology 85 (4), 315-322, 2007 | 25 | 2007 |
| Local genetic context shapes the function of a gene regulatory network A Nagy-Staron, K Tomasek, C Caruso Carter, E Sonnleitner, B Kavčič, ... Elife 10, e65993, 2021 | 23 | 2021 |
| First steps towards a runtime comparison of natural and artificial evolution T Paixao, J Pérez Heredia, D Sudholt, B Trubenova Proceedings of the 2015 Annual Conference on Genetic and Evolutionary …, 2015 | 19 | 2015 |
| Selection limits to adaptive walks on correlated landscapes JP Heredia, B Trubenová, D Sudholt, T Paixão Genetics 205 (2), 803-825, 2017 | 17 | 2017 |
| Model checking gene regulatory networks M Giacobbe, CC Guet, A Gupta, TA Henzinger, T Paixão, T Petrov International Conference on Tools and Algorithms for the Construction and …, 2015 | 17 | 2015 |
Dirk SudholtUniversity of Passau, GermanyVerified email at uni-passau.de
