| ADO: A disease ontology representing the domain knowledge specific to Alzheimer's disease A Malhotra, E Younesi, M Gündel, B Müller, MT Heneka, ... Alzheimer's & dementia 10 (2), 238-246, 2014 | 118 | 2014 |
| PDON: Parkinson’s disease ontology for representation and modeling of the Parkinson’s disease knowledge domain E Younesi, A Malhotra, M Gündel, P Scordis, AT Kodamullil, M Page, ... Theoretical Biology and Medical Modelling 12, 1-17, 2015 | 41 | 2015 |
| Knowledge retrieval from pubmed abstracts and electronic medical records with the multiple sclerosis ontology A Malhotra, M Gündel, AM Rajput, HT Mevissen, A Saiz, X Pastor, ... PloS one 10 (2), e0116718, 2015 | 36 | 2015 |
| DC-ATLAS: a systems biology resource to dissect receptor specific signal transduction in dendritic cells D Cavalieri, D Rivero, L Beltrame, SI Buschow, E Calura, L Rizzetto, ... Immunome research 6, 1-12, 2010 | 30 | 2010 |
| Knowledge sharing and collaboration in translational research, and the DC-THERA Directory A Splendiani, M Gündel, JM Austyn, D Cavalieri, C Scognamiglio, ... Briefings in bioinformatics 12 (6), 562-575, 2011 | 20 | 2011 |
| Computational modelling approaches on epigenetic factors in neurodegenerative and autoimmune diseases and their mechanistic analysis A Khanam Irin, M Gündel, M Hofmann-Apitius Journal of immunology research 2015, 2015 | 19 | 2015 |
| Towards a pathway inventory of the human brain for modeling disease mechanisms underlying neurodegeneration A Iyappan, M Guendel, M Shahid, J Wang, H Li, HT Mevissen, B Mueller, ... Journal of Alzheimer's Disease 52 (4), 1343-1360, 2016 | 16 | 2016 |
| HuPSON: the human physiology simulation ontology M Gündel, E Younesi, A Malhotra, J Wang, H Li, B Zhang, B de Bono, ... Journal of biomedical semantics 4, 1-9, 2013 | 11 | 2013 |
| CSEO–the Cigarette Smoke Exposure Ontology E Younesi, S Ansari, M Guendel, S Ahmadi, C Coggins, J Hoeng, ... Journal of biomedical semantics 5, 1-11, 2014 | 9 | 2014 |
| BEL2ABM: agent-based simulation of static models in Biological Expression Language M Gündel, CT Hoyt, M Hofmann-Apitius Bioinformatics 34 (13), 2316-2318, 2018 | 1 | 2018 |
| METADATA AND ONTOLOGIES FOR HEALTH G Colombo, D Merico, M Gündel Handbook of Metadata, Semantics and Ontologies, 243-278, 2014 | 1 | 2014 |
| DC-THERA Directory, a Knowledge Management System for the support of the European Dendritic Cell Immunology Community. M Brandizi, M Gündel, C Scognamiglio, A Splendiani SWAT4LS, 2009 | 1 | 2009 |
| The DC-THERA Directory: A Knowledge Management System to Support Collaboration on Dendritic Cell and Immunology Research. M Gündel, C Scognamiglio, M Brandizi, A Splendiani SWAT4LS, 2008 | 1 | 2008 |
| CHAPTER III. 2 METADATA AND ONTOLOGIES FOR HEALTH G Colombo, D Merico, M Gündel Handbook Of Metadata, Semantics And Ontologies, 243, 2013 | | 2013 |
| ADO: A formal ontology for understanding structure of information and domain knowledge of Alzheimer's disease. A Malhotra, M Gündel, M Hofmann-Apitius ICBO, 2012 | | 2012 |
| Combining text mining and microarray analysis CM Friedrich, M Gündel | | 2009 |
| Entwicklung von Strategien zur Erkennung von Schreibvarianten bei der automatischen Namenserkennung von Proteinnamen M Gündel | | 2005 |
| Statistical web service in medicine M Gündel, A Donzelli, F Sicurello | | |
