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Heiko A. Schmidt
Heiko A. Schmidt
Center for Integrative Bioinformatics Vienna (CIBIV)
Verified email at univie.ac.at - Homepage
Title
Cited by
Cited by
Year
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
LT Nguyen, HA Schmidt, A von Haeseler, BQ Minh
Molecular Biology and Evolution 32 (1), 268-274, 2015
176042015
IQ-TREE 2: New models and efficient methods for phylogenetic inference in the genomic era
BQ Minh, HA Schmidt, O Chernomor, D Schrempf, MD Woodhams, ...
Molecular Biology and Evolution 37 (5), 1530-1534, 2020
64032020
TREE-PUZZLE: maximum likelihood phylogenetic analysis using quartets and parallel computing
HA Schmidt, K Strimmer, M Vingron, A von Haeseler
Bioinformatics 18 (3), 502-504, 2002
28852002
Unexpected complexity of the Wnt gene family in a sea anemone
A Kusserow, K Pang, C Sturm, M Hrouda, J Lentfer, HA Schmidt, ...
Nature 433 (7022), 156-160, 2005
6852005
Multiple Wnts are involved in Hydra organizer formation and regeneration
T Lengfeld, H Watanabe, O Simakov, D Lindgens, L Gee, L Law, ...
Developmental biology 330 (1), 186-199, 2009
3202009
Expression of secreted Wnt pathway components reveals unexpected complexity of the planarian amputation response
KA Gurley, SA Elliott, O Simakov, HA Schmidt, TW Holstein, AS Alvarado
Developmental biology 347 (1), 24-39, 2010
2282010
An ancient Wnt-Dickkopf antagonism in hydra
C Guder, S Pinho, TG Nacak, HA Schmidt, B Hobmayer, C Niehrs, ...
Development 133 (5), 901-911, 2006
1892006
First DNA sequences from Asian cave bear fossils reveal deep divergences and complex phylogeographic patterns
M Knapp, N Rohland, J Weinstock, G Baryshnikov, A Sher, D Nagel, ...
Molecular Ecology 18 (6), 1225-1238, 2009
1212009
Genetic interaction between distinct Dobrava hantavirus subtypes in Apodemus agrarius and A. flavicollis in nature
B Klempa, HA Schmidt, R Ulrich, S Kaluz, M Labuda, H Meisel, B Hjelle, ...
Journal of virology 77 (1), 804-809, 2003
1172003
Nodal signalling determines biradial asymmetry in Hydra
H Watanabe, HA Schmidt, A Kuhn, SK Höger, Y Kocagöz, ...
Nature 515 (7525), 112-115, 2014
1102014
pIQPNNI: parallel reconstruction of large maximum likelihood phylogenies
BQ Minh, LS Vinh, A von Haeseler, HA Schmidt
Bioinformatics 21 (19), 3794-3796, 2005
1022005
Corrigendum to: IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era
BQ Minh, HA Schmidt, O Chernomor, D Schrempf, MD Woodhams, ...
Molecular Biology and Evolution 37 (8), 2461, 2020
1012020
Want to track pandemic variants faster? Fix the bioinformatics bottleneck
EB Hodcroft, N De Maio, R Lanfear, DR MacCannell, BQ Minh, ...
Nature 591 (7848), 30-33, 2021
992021
Maximum‐Likelihood Analysis Using TREE‐PUZZLE
HA Schmidt, A von Haeseler
Current Protocols in Bioinformatics 17 (1), 6.6.1-6.6.23, 2007
982007
Sampling bias and incorrect rooting make phylogenetic network tracing of SARS-COV-2 infections unreliable
C Mavian, SK Pond, S Marini, BR Magalis, AM Vandamme, S Dellicour, ...
Proceedings of the National Academy of Sciences 117 (23), 12522-12523, 2020
812020
Accuracy of phylogeny reconstruction methods combining overlapping gene data sets.
A Kupczok, HA Schmidt, A von Haeseler
Algorithms for Molecular Biology 5 (1), 1-17, 2010
742010
Rooted triple consensus and anomalous gene trees
GB Ewing, I Ebersberger, HA Schmidt, A von Haeseler
BMC evolutionary biology 8 (1), 118, 2008
672008
Phylogenetic trees from large datasets
HA Schmidt
PhD Thesis, 2003
652003
Phylogenetic inference using maximum likelihood methods
HA Schmidt, A von Haeseler
The phylogenetic handbook: A practical approach to phylogenetic analysis and …, 2009
632009
Comparative genomics identifies epidermal proteins associated with the evolution of the turtle shell
KB Holthaus, B Strasser, W Sipos, HA Schmidt, V Mlitz, S Sukseree, ...
Molecular biology and evolution 33 (3), 726-737, 2016
502016
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Articles 1–20