|Recon 2.2: from reconstruction to model of human metabolism|
N Swainston, K Smallbone, H Hefzi, PD Dobson, J Brewer, M Hanscho, ...
Metabolomics 12 (7), 109, 2016
|Rapid neurogenesis through transcriptional activation in human stem cells|
V Busskamp, NE Lewis, P Guye, AHM Ng, SL Shipman, SM Byrne, ...
Molecular systems biology 10 (11), 2014
|A consensus genome-scale reconstruction of Chinese hamster ovary cell metabolism|
H Hefzi, KS Ang, M Hanscho, A Bordbar, D Ruckerbauer, M Lakshmanan, ...
Cell systems 3 (5), 434-443. e8, 2016
|A systematic evaluation of methods for tailoring genome-scale metabolic models|
S Opdam, A Richelle, B Kellman, S Li, DC Zielinski, NE Lewis
Cell systems 4 (3), 318-329. e6, 2017
|Ribosome profiling-guided depletion of an mRNA increases cell growth rate and protein secretion|
TB Kallehauge, S Li, LE Pedersen, TK Ha, D Ley, MR Andersen, ...
Scientific reports 7 (1), 1-12, 2017
|Quantitative feature extraction from the Chinese hamster ovary bioprocess bibliome using a novel meta-analysis workflow|
A Golabgir, JM Gutierrez, H Hefzi, S Li, BO Palsson, C Herwig, NE Lewis
Biotechnology advances 34 (5), 621-633, 2016
|A reference genome of the Chinese hamster based on a hybrid assembly strategy|
O Rupp, ML MacDonald, S Li, H Dhiman, S Polson, S Griep, K Heffner, ...
Biotechnology and bioengineering 115 (8), 2087-2100, 2018
|Whole-genome sequencing of invasion-resistant cells identifies laminin α2 as a host factor for bacterial invasion|
XM Van Wijk, S Döhrmann, BM Hallström, S Li, BG Voldborg, BX Meng, ...
MBio 8 (1), e02128-16, 2017
|Modulating carbohydrate–protein interactions through glycoengineering of monoclonal antibodies to impact cancer physiology|
AWT Chiang, S Li, PN Spahn, A Richelle, CC Kuo, M Samoudi, NE Lewis
Current opinion in structural biology 40, 104-111, 2016
|Dual RNA-seq identifies human mucosal immunity protein Mucin-13 as a hallmark of Plasmodium exoerythrocytic infection|
GM LaMonte, P Orjuela-Sanchez, J Calla, LT Wang, S Li, J Swann, ...
Nature communications 10 (1), 1-13, 2019
|Proteogenomic annotation of Chinese hamsters reveals extensive novel translation events and endogenous retroviral elements|
S Li, SW Cha, K Heffner, DB Hizal, MA Bowen, R Chaerkady, RN Cole, ...
Journal of proteome research 18 (6), 2433-2445, 2019
|Genome-scale reconstructions of the mammalian secretory pathway predict metabolic costs and limitations of protein secretion|
JM Gutierrez, A Feizi, S Li, TB Kallehauge, H Hefzi, LM Grav, D Ley, ...
Nature Communications 11 (1), 1-10, 2020