| Logan: High-performance gpu-based x-drop long-read alignment A Zeni, G Guidi, M Ellis, N Ding, MD Santambrogio, S Hofmeyr, A Buluç, ... 2020 IEEE International Parallel and Distributed Processing Symposium (IPDPS …, 2020 | 48 | 2020 |
| Pushing the level of abstraction of digital system design: A survey on how to program fpgas ED Sozzo, D Conficconi, A Zeni, M Salaris, D Sciuto, MD Santambrogio ACM Computing Surveys 55 (5), 1-48, 2022 | 25 | 2022 |
| Optimized implementation of the hpcg benchmark on reconfigurable hardware A Zeni, K O’Brien, M Blott, MD Santambrogio European Conference on Parallel Processing, 616-630, 2021 | 14 | 2021 |
| The importance of being x-drop: High performance genome alignment on reconfigurable hardware A Zeni, GW Di Donato, L Di Tucci, M Rabozzi, MD Santambrogio 2021 IEEE 29th Annual International Symposium on Field-Programmable Custom …, 2021 | 12 | 2021 |
| An fpga-based computing infrastructure tailored to efficiently scaffold genome sequences A Zeni, M Crespi, L Di Tucci, MD Santambrogio 2019 IEEE 27th Annual International Symposium on Field-Programmable Custom …, 2019 | 8 | 2019 |
| Surfing the wavefront of genome alignment B Branchini, G Gerometta, L Cicolini, A Zeni, E Del Sozzo, ... 2022 IEEE International Symposium on Circuits and Systems (ISCAS), 1754-1758, 2022 | 4 | 2022 |
| Fast genome analysis leveraging exact string matching B Branchini, S Breschi, A Zeni, MD Santambrogio 2022 IEEE International Parallel and Distributed Processing Symposium …, 2022 | 3 | 2022 |
| On the genome sequence alignment fpga acceleration via ksw2z A Zeni, GW Di Donato, A Della Valle, F Carloni, MD Santambrogio 2023 IEEE International Symposium on Circuits and Systems (ISCAS), 1-5, 2023 | 2 | 2023 |
| New solution for a (scaff) old problem: an fpga approach A Zeni, E Del Sozzo, B Branchini, L Di Tucci, MD Santambrogio 2023 IEEE International Parallel and Distributed Processing Symposium …, 2023 | 2 | 2023 |
| circFA: a FPGA-based circular RNA aligner A Zeni, F Peverelli, E Cabri, L Di Tucci, L Cerina, MD Santambrogio 2019 IEEE EMBS International Conference on Biomedical & Health Informatics …, 2019 | 2 | 2019 |
| TSUNAMI: A GPU implementation of the WFA algorithm G Gerometta, A Zeni, MD Santambrogio 2023 32nd International Conference on Parallel Architectures and Compilation …, 2023 | 1 | 2023 |
| Starlight: A kernel optimizer for GPU processing A Zeni, E Del Sozzo, E D'Arnese, D Conficconi, MD Santambrogio Journal of Parallel and Distributed Computing 187, 104832, 2024 | | 2024 |
| Methods for the alignment of sequence reads to non-acyclic genome graphs on heterogeneous computing systems GW Di Donato, A Zeni, M Coggi, G Bruno, MD Santambrogio | | 2023 |
| Method of aligning strings of characters representing genomic data and related hardware device Z Alberto, M Crespi, L Di Tucci, MD Santambrogio, F Pizzato US Patent App. 17/594,585, 2022 | | 2022 |
| A Methodology for Accelerating Variant Calling on GPU B Branchini, A Zeni, MD Santambrogio | | 2021 |
| Leveraging Succinct Data Structures for DNA Sequence Mapping on FPGA GW Di Donato, A Zeni, L Di Tucci, MD Santambrogio 2020 IEEE International Parallel and Distributed Processing Symposium …, 2020 | | 2020 |
| LOGAN: High-Performance X-Drop Pairwise Alignment on GPU (LOGAN) v1. 0 G Guidi, A Zeni Lawrence Berkeley National Laboratory (LBNL), Berkeley, CA (United States …, 2019 | | 2019 |
| Metodo di allineamento di stringhe di caratteri che rappresentano dati genomici e relativo dispositivo hardware A Zeni, M Crespi, L Di Tucci, M Santambrogio, F Pizzato | | 2019 |
| A methodology for automatic GPU kernel optimization A ZENI Politecnico di Milano, 2018 | | 2018 |
Marco Domenico SantambrogioAssociate professor, Politecnico di MilanoBestätigte E-Mail-Adresse bei polimi.it
