Batch effects and the effective design of single-cell gene expression studies PY Tung, JD Blischak, CJ Hsiao, DA Knowles, JE Burnett, JK Pritchard, ... Scientific reports 7 (1), 1-15, 2017 | 285 | 2017 |
Methylation QTLs are associated with coordinated changes in transcription factor binding, histone modifications, and gene expression levels NE Banovich, X Lan, G McVicker, B Van de Geijn, JF Degner, JD Blischak, ... PLoS genetics 10 (9), e1004663, 2014 | 266 | 2014 |
A quick introduction to version control with Git and GitHub JD Blischak, ER Davenport, G Wilson PLoS computational biology 12 (1), e1004668, 2016 | 182 | 2016 |
Determining the genetic basis of anthracycline-cardiotoxicity by molecular response QTL mapping in induced cardiomyocytes DA Knowles, CK Burrows, JD Blischak, KM Patterson, DJ Serie, N Norton, ... Elife 7, e33480, 2018 | 66 | 2018 |
Mycobacterial infection induces a specific human innate immune response JD Blischak, L Tailleux, A Mitrano, LB Barreiro, Y Gilad bioRxiv, 2015 | 61 | 2015 |
Discovery and characterization of variance QTLs in human induced pluripotent stem cells AK Sarkar, PY Tung, JD Blischak, JE Burnett, YI Li, M Stephens, Y Gilad PLoS genetics 15 (4), e1008045, 2019 | 46 | 2019 |
Characterizing and inferring quantitative cell cycle phase in single-cell RNA-seq data analysis CJ Hsiao, PY Tung, JD Blischak, JE Burnett, KA Barr, KK Dey, ... Genome research 30 (4), 611-621, 2020 | 39 | 2020 |
Creating and sharing reproducible research code the workflowr way JD Blischak, P Carbonetto, M Stephens F1000Research 8, 2019 | 33 | 2019 |
A comparative study of endoderm differentiation in humans and chimpanzees LE Blake, SM Thomas, JD Blischak, CJ Hsiao, C Chavarria, M Myrthil, ... Genome biology 19 (1), 1-18, 2018 | 23 | 2018 |
Predicting susceptibility to tuberculosis based on gene expression profiling in dendritic cells JD Blischak, L Tailleux, M Myrthil, C Charlois, E Bergot, A Dinh, G Morizot, ... Scientific reports 7 (1), 1-11, 2017 | 14 | 2017 |
Patterns of transcriptional response to 1, 25-dihydroxyvitamin D3 and bacterial lipopolysaccharide in primary human monocytes SN Kariuki, JD Blischak, S Nakagome, DB Witonsky, A Di Rienzo G3: Genes, Genomes, Genetics 6 (5), 1345-1355, 2016 | 11 | 2016 |
Mycobacterial infection induces a specific human innate immune response. Sci Rep. 2015; 5: 16882 JD Blischak, L Tailleux, A Mitrano, LB Barreiro, Y Gilad Epub 2015/11/21. doi: 10.1038/srep16882. PubMed PMID: 26586179, 0 | 7 | |
Batch effects and the effective design of single-cell gene expression studies. Sci Rep 7: 39921 PY Tung, JD Blischak, CJ Hsiao, DA Knowles, JE Burnett, JK Pritchard, ... | 5 | 2017 |
A Methodological Assessment and Characterization of Genetically-Driven Variation in Three Human Phosphoproteomes BW Engelmann, CJ Hsiao, JD Blischak, Y Fourne, Z Khan, M Ford, ... Scientific reports 8 (1), 1-13, 2018 | 2 | 2018 |
The Effects of Growth Hormone and Insulin-Like Growth Factor-1 Treatments on Hepatic Gene Expression in Obese and Diabetic Mice with Nonalcoholic Fatty Liver Disease JD Blischak Ohio University, 2010 | 1 | 2010 |
Investigating susceptibility to tuberculosis using functional genomics approaches JD Blischak The University of Chicago, 2016 | | 2016 |
The Laron Mouse JJ Kopchick, JD Blischak Laron Syndrome-From Man to Mouse, 429-432, 2011 | | 2011 |
Mycobacterial infection induces a specific human innate immune JD Blischak, L Tailleux, A Mitrano, LB Barreiro, Y Gilad | | |
way [version 1; peer review: awaiting peer review] JD Blischak, P Carbonetto, M Stephens | | |