An O (n 5) algorithm for MFE prediction of kissing hairpins and 4-chains in nucleic acids HL Chen, A Condon, H Jabbari Journal of Computational Biology 16 (6), 803-815, 2009 | 45 | 2009 |
A fast and robust iterative algorithm for prediction of RNA pseudoknotted secondary structures H Jabbari, A Condon BMC bioinformatics 15 (1), 1-17, 2014 | 30 | 2014 |
Novel and efficient RNA secondary structure prediction using hierarchical folding H Jabbari, A Condon, S Zhao Journal of Computational Biology 15 (2), 139-163, 2008 | 30 | 2008 |
Computational approaches to nucleic acid origami H Jabbari, M Aminpour, C Montemagno ACS combinatorial science 17 (10), 535-547, 2015 | 27 | 2015 |
HFold: RNA pseudoknotted secondary structure prediction using hierarchical folding H Jabbari, A Condon, A Pop, C Pop, Y Zhao International Workshop on Algorithms in Bioinformatics, 323-334, 2007 | 19 | 2007 |
Knotty: efficient and accurate prediction of complex RNA pseudoknot structures H Jabbari, I Wark, C Montemagno, S Will Bioinformatics 34 (22), 3849-3856, 2018 | 18 | 2018 |
Computational prediction of nucleic acid secondary structure: Methods, applications, and challenges A Condon, H Jabbari Theoretical Computer Science 410 (4-5), 294-301, 2009 | 12 | 2009 |
RNA secondary structure prediction with pseudoknots: Contribution of algorithm versus energy model H Jabbari, I Wark, C Montemagno Plos one 13 (4), e0194583, 2018 | 11 | 2018 |
Sparse RNA folding revisited: space-efficient minimum free energy structure prediction S Will, H Jabbari Algorithms for Molecular Biology 11 (1), 1-13, 2016 | 11 | 2016 |
Regulation of von Willebrand factor gene in endothelial cells that are programmed to pluripotency and differentiated back to endothelial cells M Nakhaei-Nejad, M Farhan, A Mojiri, H Jabbari, AG Murray, N Jahroudi Stem Cells 37 (4), 542-554, 2019 | 8 | 2019 |
A new class of cellular automata H Jabbari, JC Muzio, L Sun 10th Euromicro Conference on Digital System Design Architectures, Methods …, 2007 | 8 | 2007 |
SARS-CoV-2 Ribosomal Frameshifting Pseudoknot: Detection of Inter-viral Structural Similarity L Trinity, L Lansing, H Jabbari, U Stege 2021 IEEE 9th International Conference on Healthcare Informatics (ICHI), 451-460, 2021 | 3* | 2021 |
Algorithms for prediction of RNA pseudoknotted secondary structures H Jabbari University of British Columbia, 2015 | 3 | 2015 |
Improved Built-In Self-Test of Sequential Circuits H Jabbari, JC Muzio, L Sun 2007 Canadian Conference on Electrical and Computer Engineering, 78-81, 2007 | 1 | 2007 |
Supervised promoter recognition: a benchmark framework RI Perez Martell, A Ziesel, H Jabbari, U Stege BMC bioinformatics 23 (1), 1-28, 2022 | | 2022 |
KnotAli: informed energy minimization through the use of evolutionary information M Gray, S Chester, H Jabbari BMC bioinformatics 23 (1), 1-28, 2022 | | 2022 |
Shapify: Pathways to SARS-CoV-2 Frameshifting Pseudoknot L Trinity, I Wark, L Lansing, H Jabbari, U Stege | | 2022 |
Viz23: web server for visualization of gene expression and locational information L Trinity, A Hollar, H Greenyer, H Jabbari, U Stege Proceedings of the 31st Annual International Conference on Computer Science …, 2021 | | 2021 |
Identification of conserved and evolving RNA secondary structures in SARS-CoV-2 and related viruses A Ziesel, H Jabbari Proceedings of the 31st Annual International Conference on Computer Science …, 2021 | | 2021 |
In silico prediction of COVID-19 test efficiency with DinoKnot T Newman, HFK Chang, H Jabbari 2021 IEEE 9th International Conference on Healthcare Informatics (ICHI), 470-479, 2021 | | 2021 |