| Deciphering microbial interactions and detecting keystone species with co-occurrence networks D Berry, S Widder Frontiers in microbiology 5, 219, 2014 | 1499 | 2014 |
| The origin and evolution of cell types D Arendt, JM Musser, CVH Baker, A Bergman, C Cepko, DH Erwin, ... Nature Reviews Genetics 17 (12), 744-757, 2016 | 739 | 2016 |
| Challenges in microbial ecology: building predictive understanding of community function and dynamics S Widder, RJ Allen, T Pfeiffer, TP Curtis, C Wiuf, WT Sloan, OX Cordero, ... The ISME journal 10 (11), 2557-2568, 2016 | 721 | 2016 |
| Fluvial network organization imprints on microbial co-occurrence networks S Widder, K Besemer, GA Singer, S Ceola, E Bertuzzo, C Quince, ... Proceedings of the National Academy of Sciences 111 (35), 12799-12804, 2014 | 219 | 2014 |
| p59OASL, a 2′–5′ oligoadenylate synthetase like protein: a novel human gene related to the 2′–5′ oligoadenylate synthetase family R Hartmann, HS Olsen, S Widder, R Jørgensen, J Justesen Nucleic acids research 26 (18), 4121-4127, 1998 | 141 | 1998 |
| The SBML ODE Solver Library: a native API for symbolic and fast numerical analysis of reaction networks R Machné, A Finney, S Müller, J Lu, S Widder, C Flamm Bioinformatics 22 (11), 1406-1407, 2006 | 139 | 2006 |
| A generalized model of the repressilator S Müller, J Hofbauer, L Endler, C Flamm, S Widder, P Schuster Journal of mathematical biology 53, 905-937, 2006 | 132 | 2006 |
| Signatures of ecological processes in microbial community time series K Faust, F Bauchinger, B Laroche, S De Buyl, L Lahti, AD Washburne, ... Microbiome 6, 1-13, 2018 | 108 | 2018 |
| Isaac Newton Institute Fellows, Soyer OS. 2016. Challenges in microbial ecology: building predictive understanding of community function and dynamics S Widder, RJ Allen, T Pfeiffer, TP Curtis, C Wiuf, WT Sloan, OX Cordero, ... ISME J 10 (11), 2557-2568, 0 | 101 | |
| Ecological networking of cystic fibrosis lung infections RA Quinn, K Whiteson, YW Lim, J Zhao, D Conrad, JJ LiPuma, F Rohwer, ... NPJ biofilms and microbiomes 2 (1), 4, 2016 | 95 | 2016 |
| Using metabolic networks to resolve ecological properties of microbiomes EEL Muller, K Faust, S Widder, M Herold, SM Arbas, P Wilmes Current Opinion in Systems Biology 8, 73-80, 2018 | 88 | 2018 |
| Dynamic patterns of gene regulation I: simple two-gene systems S Widder, J Schicho, P Schuster Journal of theoretical biology 246 (3), 395-419, 2007 | 86 | 2007 |
| Why are cellular switches Boolean? General conditions for multistable genetic circuits J Macía, S Widder, R Solé Journal of theoretical biology 261 (1), 126-135, 2009 | 57 | 2009 |
| Biogeographic variation in the microbiome of the ecologically important sponge, Carteriospongia foliascens HM Luter, S Widder, ES Botté, MA Wahab, S Whalan, L Moitinho-Silva, ... PeerJ 3, e1435, 2015 | 54 | 2015 |
| Specialized or flexible feed-forward loop motifs: a question of topology J Macía, S Widder, R Solé BMC systems biology 3, 1-18, 2009 | 45 | 2009 |
| Ultra deep sequencing of Listeria monocytogenes sRNA transcriptome revealed new antisense RNAs S Behrens, S Widder, GK Mannala, X Qing, R Madhugiri, N Kefer, ... PLoS One 9 (2), e83979, 2014 | 43 | 2014 |
| Metagenomic Analysis Reveals Presence of Treponema denticola in a Tissue Biopsy of the Iceman F Maixner, A Thomma, G Cipollini, S Widder, T Rattei, A Zink PloS one 9 (6), e99994, 2014 | 36 | 2014 |
| Monomeric bistability and the role of autoloops in gene regulation S Widder, J Macía, R Solé PloS One 4 (4), e5399, 2009 | 27 | 2009 |
| Evolvability of feed-forward loop architecture biases its abundance in transcription networks S Widder, R Solé, J Macía BMC systems biology 6, 1-9, 2012 | 26 | 2012 |
| Multi-omics profiling predicts allograft function after lung transplantation ML Watzenboeck, AD Gorki, F Quattrone, R Gawish, S Schwarz, ... European Respiratory Journal 59 (2), 2022 | 25 | 2022 |
David BerryProfessor, University of ViennaVerified email at univie.ac.at
