Cole Lyman
Cole Lyman
Center for Clinical Systems Biology, Rochester General Hospital
Verified email at byu.edu - Homepage
Title
Cited by
Cited by
Year
Genome polymorphism detection through relaxed de bruijn graph construction
MS Fujimoto, C Lyman, A Suvorov, P Bodily, Q Snell, K Crandall, S Bybee, ...
2017 IEEE 17th International Conference on Bioinformatics and Bioengineering …, 2017
32017
The polygraph: A data structure for genome alignment and variation detection
MS Fujimoto, C Lyman, M Clement
22019
Whole Genome Phylogenetic Tree Reconstruction Using Colored de Bruijn Graphs
CA Lyman, MS Fujimoto, A Suvorov, PM Bodily, Q Snell, KA Crandall, ...
arXiv preprint arXiv:1709.00164, 2017
22017
Feedback regulation of immune response to maximum exercise in gulf war Illness
CA Lyman, M Clement, TJA Craddock, M Fletcher, NG Klimas, ...
Proceedings of the 10th ACM International Conference on Bioinformatics …, 2019
12019
GNUMAP 4.0: Space and Time Efficient NGS Read Mapping Using the FM-Index
MS Fujimoto, CA Lyman, PM Bodily, MJ Clement, Q Snell
Insights of Bioinformatics 1 (1), 1-8, 2018
12018
The PepSeq Pipeline: Software for Antimicrobial Motif Discovery in Randomly-Generated Peptide Libraries
TD Jensen, KA Bresciano, E Dallon, MS Fujimoto, CA Lyman, E Stewart, ...
Proceedings of the 2018 ACM International Conference on Bioinformatics …, 2018
12018
Hacking the Immune Response to Infection in Chronic Obstructive Pulmonary Disease
MC Morris, S Richman, CA Lyman, J Qu, MJ Mammen, S Sethi, ...
2020 IEEE 20th International Conference on Bioinformatics and Bioengineering …, 2020
2020
Predicting the Immune Response to Repurposed Drugs in Coronavirus-induced Cytokine Storm
MC Morris, CA Lyman, S Richman, HB Cao, C Cheadle, G Broderick
2020 IEEE 20th International Conference on Bioinformatics and Bioengineering …, 2020
2020
Capturing the pathway logic of cell signaling for epithelial-mesenchymal transition in ovarian cancer cell lines.
M Morris, J Clark, C Lyman, J Brown Broderick, ZB Kramer, G Skuse, ...
Journal of Clinical Oncology 38 (15_suppl), e18063-e18063, 2020
2020
Kcollections: A Fast and Efficient Library for K-mers
MS Fujimoto, CA Lyman, MJ Clement
2020 IEEE International Parallel and Distributed Processing Symposium …, 2020
2020
Comparative Genomics Using the Colored de Bruijn Graph
CA Lyman
2020
When the How Outweighs the What: the Pivotal Importance of Context
CA Lyman, C Anderson, M Morris, UK Nandal, MJ Martindale, M Clement, ...
2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2019
2019
Discovering the Right Questions in Big Data: The Colored de Bruijn Graph Approach
B Unhelkar, C Lyman
Cutter Business Technology Journal 30 (10/11), 29-34, 2017
2017
Modeling Global and local Codon Bias with Deep Language Models
MS Fujimoto, PM Bodily, CA Lyman, AJ Jacobsen, Q Snell, MJ Clement
2017 IEEE 17th International Conference on Bioinformatics and Bioengineering …, 2017
2017
Learning the Language of Genes: Representing Global Codon Bias with Deep Language Models
MS Fujimoto, PM Bodily, CA Lyman, JA Jacobsen, MJ Clement
2017
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Articles 1–15