The genotype-tissue expression (GTEx) project J Lonsdale, J Thomas, M Salvatore, R Phillips, E Lo, S Shad, R Hasz, ... Nature genetics 45 (6), 580-585, 2013 | 7585 | 2013 |
The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans GTEx Consortium, KG Ardlie, DS Deluca, AV Segrè, TJ Sullivan, ... Science 348 (6235), 648-660, 2015 | 4562 | 2015 |
Considering transposable element diversification in de novo annotation approaches T Flutre, E Duprat, C Feuillet, H Quesneville PloS one 6 (1), e16526, 2011 | 514 | 2011 |
A statistical framework for joint eQTL analysis in multiple tissues T Flutre, X Wen, J Pritchard, M Stephens PLoS genetics 9 (5), e1003486, 2013 | 309 | 2013 |
Extensive synteny conservation of holocentric chromosomes in Lepidoptera despite high rates of local genome rearrangements E d'Alençon, H Sezutsu, F Legeai, E Permal, S Bernard-Samain, ... Proceedings of the National Academy of Sciences 107 (17), 7680-7685, 2010 | 188 | 2010 |
The ABO blood group is a trans-species polymorphism in primates L Ségurel, EE Thompson, T Flutre, J Lovstad, A Venkat, SW Margulis, ... Proceedings of the National Academy of Sciences 109 (45), 18493-18498, 2012 | 187 | 2012 |
The epigenomic landscape of African rainforest hunter-gatherers and farmers M Fagny, E Patin, JL MacIsaac, M Rotival, T Flutre, MJ Jones, KJ Siddle, ... Nature communications 6 (1), 10047, 2015 | 88 | 2015 |
TriAnnot: a versatile and high performance pipeline for the automated annotation of plant genomes P Leroy, N Guilhot, H Sakai, A Bernard, F Choulet, S Theil, S Reboux, ... Frontiers in plant science 3, 5, 2012 | 86 | 2012 |
The wild grape genome sequence provides insights into the transition from dioecy to hermaphroditism during grape domestication H Badouin, A Velt, F Gindraud, T Flutre, V Dumas, S Vautrin, W Marande, ... Genome Biology 21, 1-24, 2020 | 51 | 2020 |
Advances in breeding for mixed cropping–incomplete factorials and the producer/associate concept B Haug, MM Messmer, J Enjalbert, I Goldringer, E Forst, T Flutre, ... Frontiers in Plant Science 11, 620400, 2021 | 39 | 2021 |
A novel high-density grapevine (Vitis vinifera L.) integrated linkage map using GBS in a half-diallel population J Tello, C Roux, H Chouiki, V Laucou, G Sarah, A Weber, S Santoni, ... Theoretical and applied genetics 132, 2237-2252, 2019 | 32 | 2019 |
A genome-wide association and prediction study in grapevine deciphers the genetic architecture of multiple traits and identifies genes under many new QTLs T Flutre, L Le Cunff, A Fodor, A Launay, C Romieu, G Berger, Y Bertrand, ... G3 12 (7), jkac103, 2022 | 24 | 2022 |
Transposable element annotation in completely sequenced eukaryote genomes T Flutre, E Permal, H Quesneville Plant Transposable Elements: Impact on Genome Structure and Function, 17-39, 2012 | 22 | 2012 |
Roadmap for annotating transposable elements in eukaryote genomes E Permal, T Flutre, H Quesneville Mobile Genetic Elements: Protocols and Genomic Applications, 53-68, 2012 | 20 | 2012 |
From cultivar mixtures to allelic mixtures: opposite effects of allelic richness between genotypes and genotype richness in wheat G Montazeaud, T Flutre, E Ballini, JB Morel, J David, J Girodolle, ... New Phytologist 233 (6), 2573-2584, 2022 | 19 | 2022 |
Adoption and optimization of genomic selection to sustain breeding for apricot fruit quality M Nsibi, B Gouble, S Bureau, T Flutre, C Sauvage, JM Audergon, ... G3: Genes, Genomes, Genetics 10 (12), 4513-4529, 2020 | 17 | 2020 |
Two main genetic clusters with high admixture between forest and cultivated chestnut (Castanea sativa Mill.) in France C Bouffartigue, S Debille, O Fabreguettes, AR Cabrer, S Pereira-Lorenzo, ... Annals of forest science 77, 1-16, 2020 | 13 | 2020 |
Quantitative Assessment of Grapevine Wood Colonization by the Dieback Fungus Eutypa lata C Moisy, G Berger, T Flutre, L Le Cunff, JP Péros Journal of Fungi 3 (2), 21, 2017 | 13 | 2017 |
Across-population genomic prediction in grapevine opens up promising prospects for breeding C Brault, V Segura, P This, L Le Cunff, T Flutre, P François, T Pons, ... Horticulture research 9, uhac041, 2022 | 12 | 2022 |
VviUCC1 Nucleotide Diversity, Linkage Disequilibrium and Association with Rachis Architecture Traits in Grapevine J Tello, R Torres-Pérez, T Flutre, J Grimplet, J Ibáñez Genes 11 (6), 598, 2020 | 10 | 2020 |