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Benjamin Doughty
Benjamin Doughty
Verified email at stanford.edu
Title
Cited by
Cited by
Year
Activity-by-contact model of enhancer–promoter regulation from thousands of CRISPR perturbations
CP Fulco, J Nasser, TR Jones, G Munson, DT Bergman, V Subramanian, ...
Nature genetics 51 (12), 1664-1669, 2019
6592019
Genome-wide enhancer maps link risk variants to disease genes
J Nasser, DT Bergman, CP Fulco, P Guckelberger, BR Doughty, ...
Nature 593 (7858), 238-243, 2021
3652021
HyPR-seq: single-cell quantification of chosen RNAs via hybridization and sequencing of DNA probes
JL Marshall, BR Doughty, V Subramanian, P Guckelberger, Q Wang, ...
Proceedings of the National Academy of Sciences 117 (52), 33404-33413, 2020
242020
Activity-by-Contact model of enhancer specificity from thousands of CRISPR perturbations
CP Fulco, J Nasser, TR Jones, G Munson, DT Bergman, V Subramanian, ...
BioRxiv, 529990, 2019
182019
Genome-wide maps of enhancer regulation connect risk variants to disease genes
J Nasser, DT Bergman, CP Fulco, P Guckelberger, BR Doughty, ...
bioRxiv, 2020.09. 01.278093, 2020
132020
Multicenter integrated analysis of noncoding CRISPRi screens
D Yao, J Tycko, JW Oh, LR Bounds, SJ Gosai, L Lataniotis, ...
Nature Methods, 1-12, 2024
52024
An encyclopedia of enhancer-gene regulatory interactions in the human genome
AR Gschwind, KS Mualim, A Karbalayghareh, MU Sheth, KK Dey, ...
bioRxiv, 2023
32023
Rewriting regulatory DNA to dissect and reprogram gene expression
GE Martyn, MT Montgomery, H Jones, K Guo, BR Doughty, J Linder, ...
bioRxiv, 2023.12. 20.572268, 2023
22023
The landscape of the histone-organized chromatin of Bdellovibrionota bacteria
GK Marinov, B Doughty, A Kundaje, WJ Greenleaf
bioRxiv, 2023
12023
HyPR Protocol
J Marshall, BR Doughty, V Subramanian, P Guckelberger, Q Wang, ...
12020
Single-molecule chromatin configurations link transcription factor binding to expression in human cells
BR Doughty, MM Hinks, JM Schaepe, GK Marinov, AR Thurm, ...
bioRxiv, 2024.02. 02.578660, 2024
2024
Single-cell chromatin state transitions during epigenetic memory formation
T Fujimori, C Rios-Martinez, AR Thurm, MM Hinks, BR Doughty, J Sinha, ...
bioRxiv, 2023
2023
Pioneering a Biobased UAS
E Block, J Byemerwa, R Dispenza, B Doughty, KN Gillyard, P Godbole, ...
Institute of Biological Engineering (IBE) Annual Conference, 2015
2015
Towards a Biosynthetic UAV
E Block, J Byemerwa, R Dispenza, B Doughty, KN Gillyard, P Godbole, ...
Advanced Studies Laboratories Poster Session, 2014
2014
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Articles 1–14