James P. Balhoff
James P. Balhoff
Renaissance Computing Institute (RENCI), University of North Carolina at Chapel Hill
Verified email at renci.org
Title
Cited by
Cited by
Year
The gene ontology resource: 20 years and still GOing strong
Gene Ontology Consortium
Nucleic acids research 47 (D1), D330-D338, 2019
14702019
The evolution of transcriptional regulation in eukaryotes
GA Wray, MW Hahn, E Abouheif, JP Balhoff, M Pizer, MV Rockman, ...
Molecular biology and evolution 20 (9), 1377-1419, 2003
12322003
Expansion of the Gene Ontology knowledgebase and resources
GO Consortium
Nucleic Acids Research 45 (D1), D331-D338, 2017
1231*2017
Expansion of the Human Phenotype Ontology (HPO) knowledge base and resources
S Köhler, L Carmody, N Vasilevsky, JOB Jacobsen, D Danis, JP Gourdine, ...
Nucleic acids research 47 (D1), D1018-D1027, 2019
3152019
Development and application of a phylogenomic toolkit: resolving the evolutionary history of Madagascar’s lemurs
JE Horvath, DW Weisrock, SL Embry, I Fiorentino, JP Balhoff, P Kappeler, ...
Genome Research 18 (3), 489-499, 2008
1802008
Finding our way through phenotypes
AR Deans, SE Lewis, E Huala, SS Anzaldo, M Ashburner, JP Balhoff, ...
PLoS Biol 13 (1), e1002033, 2015
1782015
The Monarch Initiative: an integrative data and analytic platform connecting phenotypes to genotypes across species
CJ Mungall, JA McMurry, S Köhler, JP Balhoff, C Borromeo, M Brush, ...
Nucleic acids research 45 (D1), D712-D722, 2017
1762017
Time to change how we describe biodiversity
AR Deans, MJ Yoder, JP Balhoff
Trends in ecology & evolution 27 (2), 78-84, 2012
1452012
Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon
MA Haendel, JP Balhoff, FB Bastian, DC Blackburn, JA Blake, Y Bradford, ...
Journal of biomedical semantics 5 (1), 1-13, 2014
932014
The teleost anatomy ontology: anatomical representation for the genomics age
WM Dahdul, JG Lundberg, PE Midford, JP Balhoff, H Lapp, TJ Vision, ...
Systematic biology 59 (4), 369-383, 2010
932010
Evolutionary characters, phenotypes and ontologies: curating data from the systematic biology literature
WM Dahdul, JP Balhoff, J Engeman, T Grande, EJ Hilton, C Kothari, ...
PLoS One 5 (5), e10708, 2010
932010
Phenex: ontological annotation of phenotypic diversity
JP Balhoff, WM Dahdul, CR Kothari, H Lapp, JG Lundberg, P Mabee, ...
PLoS One 5 (5), e10500, 2010
902010
An overview of the BioCreative 2012 Workshop Track III: interactive text mining task
CN Arighi, B Carterette, KB Cohen, M Krallinger, WJ Wilbur, P Fey, ...
Database 2013, 2013
852013
Evolutionary analysis of the well characterized endo16 promoter reveals substantial variation within functional sites
JP Balhoff, GA Wray
Proceedings of the National Academy of Sciences 102 (24), 8591-8596, 2005
832005
NeXML: rich, extensible, and verifiable representation of comparative data and metadata
RA Vos, JP Balhoff, JA Caravas, MT Holder, H Lapp, WP Maddison, ...
Systematic biology 61 (4), 675-689, 2012
822012
A hymenopterists’ guide to the Hymenoptera Anatomy Ontology: utility, clarification, and future directions
K Seltmann, M Yoder, I Miko, M Forshage, M Bertone, D Agosti, A Austin, ...
Journal of Hymenoptera Research 27, 67, 2012
632012
Highly specific and quantitative activation of STATs in 3T3-L1 adipocytes
JP Balhoff, JM Stephens
Biochemical and biophysical research communications 247 (3), 894-900, 1998
631998
500,000 fish phenotypes: The new informatics landscape for evolutionary and developmental biology of the vertebrate skeleton
P Mabee, JP Balhoff, WM Dahdul, H Lapp, PE Midford, TJ Vision, ...
Journal of Applied Ichthyology 28 (3), 300-305, 2012
522012
A semantic model for species description applied to the ensign wasps (Hymenoptera: Evaniidae) of New Caledonia
JP Balhoff, I Mikó, MJ Yoder, PL Mullins, AR Deans
Systematic Biology 62 (5), 639-659, 2013
492013
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species
KA Shefchek, NL Harris, M Gargano, N Matentzoglu, D Unni, M Brush, ...
Nucleic acids research 48 (D1), D704-D715, 2020
452020
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