Antonio Scialdone
Antonio Scialdone
Principal Investigator, Helmholtz Zentrum München, Institute of Epigenetics and Stem Cells
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Computational analysis of cell-to-cell heterogeneity in single-cell RNA-sequencing data reveals hidden subpopulations of cells
F Buettner, KN Natarajan, FP Casale, V Proserpio, A Scialdone, FJ Theis, ...
Nature biotechnology 33 (2), 155-160, 2015
Complex multi-enhancer contacts captured by genome architecture mapping
RA Beagrie, A Scialdone, M Schueler, DCA Kraemer, M Chotalia, SQ Xie, ...
Nature 543 (7646), 519-524, 2017
Adipocyte accumulation in the bone marrow during obesity and aging impairs stem cell-based hematopoietic and bone regeneration
TH Ambrosi, A Scialdone, A Graja, S Gohlke, AM Jank, C Bocian, L Woelk, ...
Cell stem cell 20 (6), 771-784. e6, 2017
Heterogeneity in Oct4 and Sox2 targets biases cell fate in 4-cell mouse embryos
M Goolam, A Scialdone, SJL Graham, IC Macaulay, A Jedrusik, ...
Cell 165 (1), 61-74, 2016
Normalizing single-cell RNA sequencing data: challenges and opportunities
CA Vallejos, D Risso, A Scialdone, S Dudoit, JC Marioni
Nature methods 14 (6), 565-571, 2017
Computational assignment of cell-cycle stage from single-cell transcriptome data
A Scialdone, KN Natarajan, LR Saraiva, V Proserpio, SA Teichmann, ...
Methods 85, 54-61, 2015
Resolving early mesoderm diversification through single-cell expression profiling
A Scialdone, Y Tanaka, W Jawaid, V Moignard, NK Wilson, IC Macaulay, ...
Nature 535 (7611), 289-293, 2016
Single-cell landscape of transcriptional heterogeneity and cell fate decisions during mouse early gastrulation
H Mohammed, I Hernando-Herraez, A Savino, A Scialdone, I Macaulay, ...
Cell reports 20 (5), 1215-1228, 2017
Arabidopsis plants perform arithmetic division to prevent starvation at night
A Scialdone, ST Mugford, D Feike, A Skeffington, P Borrill, A Graf, ...
Elife 2, e00669, 2013
Pluripotent state transitions coordinate morphogenesis in mouse and human embryos
MN Shahbazi, A Scialdone, N Skorupska, A Weberling, G Recher, M Zhu, ...
Nature 552 (7684), 239-243, 2017
Using single‐cell genomics to understand developmental processes and cell fate decisions
JA Griffiths, A Scialdone, JC Marioni
Molecular systems biology 14 (4), e8046, 2018
Hierarchical deconstruction of mouse olfactory sensory neurons: from whole mucosa to single-cell RNA-seq
LR Saraiva, X Ibarra-Soria, M Khan, M Omura, A Scialdone, P Mombaerts, ...
Scientific reports 5 (1), 1-17, 2015
Defining murine organogenesis at single-cell resolution reveals a role for the leukotriene pathway in regulating blood progenitor formation
X Ibarra-Soria, W Jawaid, B Pijuan-Sala, V Ladopoulos, A Scialdone, ...
Nature cell biology 20 (2), 127-134, 2018
Epstein–Barr virus reprograms human B lymphocytes immediately in the prelatent phase of infection
P Mrozek-Gorska, A Buschle, D Pich, T Schwarzmayr, R Fechtner, ...
Proceedings of the National Academy of Sciences 116 (32), 16046-16055, 2019
How plants manage food reserves at night: quantitative models and open questions
A Scialdone, M Howard
Frontiers in plant science 6, 204, 2015
Conformation regulation of the X chromosome inactivation center: a model
A Scialdone, I Cataudella, M Barbieri, A Prisco, M Nicodemi
PLoS computational biology 7 (10), e1002229, 2011
A spatially resolved single cell atlas of human gastrulation
RCV Tyser, E Mahammadov, S Nakanoh, L Vallier, A Scialdone, ...
BioRxiv, 2020
Mechanics and dynamics of X-chromosome pairing at X inactivation
A Scialdone, M Nicodemi
PLoS computational biology 4 (12), e1000244, 2008
Characterization of a common progenitor pool of the epicardium and myocardium
RCV Tyser, X Ibarra-Soria, K McDole, SA Jayaram, J Godwin, ...
Science 371 (6533), 2021
Spatiotemporal patterning of EpCAM is important for murine embryonic endo-and mesodermal differentiation
S Sarrach, Y Huang, S Niedermeyer, M Hachmeister, L Fischer, S Gille, ...
Scientific reports 8 (1), 1-18, 2018
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