| Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer J Wirbel, PT Pyl, E Kartal, K Zych, A Kashani, A Milanese, JS Fleck, ... Nature medicine 25 (4), 679-689, 2019 | 852 | 2019 |
| DISEASES: Text mining and data integration of disease–gene associations S Pletscher-Frankild, A Pallejà, K Tsafou, JX Binder, LJ Jensen Methods 74, 83-89, 2015 | 596 | 2015 |
| Recovery of gut microbiota of healthy adults following antibiotic exposure A Palleja, KH Mikkelsen, SK Forslund, A Kashani, KH Allin, T Nielsen, ... Nature microbiology 3 (11), 1255-1265, 2018 | 591 | 2018 |
| Roux-en-Y gastric bypass surgery of morbidly obese patients induces swift and persistent changes of the individual gut microbiota A Palleja, A Kashani, KH Allin, T Nielsen, C Zhang, Y Li, T Brach, S Liang, ... Genome medicine 8, 1-13, 2016 | 312 | 2016 |
| Protein-driven inference of miRNA–disease associations S Mørk, S Pletscher-Frankild, A Palleja Caro, J Gorodkin, LJ Jensen Bioinformatics 30 (3), 392-397, 2014 | 209 | 2014 |
| Identification of novel type 1 diabetes candidate genes by integrating genome-wide association data, protein-protein interactions, and human pancreatic islet gene expression R Bergholdt, C Brorsson, A Palleja, LA Berchtold, T Fløyel, ... Diabetes 61 (4), 954-962, 2012 | 147 | 2012 |
| Large gene overlaps in prokaryotic genomes: result of functional constraints or mispredictions? A Pallejà, ED Harrington, P Bork BMC genomics 9, 1-10, 2008 | 79 | 2008 |
| Metabolic and gut microbiome changes following GLP-1 or dual GLP-1/GLP-2 receptor agonist treatment in diet-induced obese mice MSA Madsen, JB Holm, A Pallejà, P Wismann, K Fabricius, K Rigbolt, ... Scientific reports 9 (1), 15582, 2019 | 70 | 2019 |
| DistiLD Database: diseases and traits in linkage disequilibrium blocks A Palleja, H Horn, S Eliasson, LJ Jensen Nucleic acids research 40 (D1), D1036-D1040, 2012 | 40 | 2012 |
| Skin dysbiosis in the microbiome in atopic dermatitis is site-specific and involves bacteria, fungus and virus RD Bjerre, JB Holm, A Palleja, J Sølberg, L Skov, JD Johansen BMC microbiology 21, 1-13, 2021 | 29 | 2021 |
| PairWise Neighbours database: overlaps and spacers among prokaryote genomes A Pallejà, T Reverter, S Garcia-Vallvé, A Romeu BMC genomics 10, 1-10, 2009 | 12 | 2009 |
| Adaptation of the short intergenic spacers between co-directional genes to the Shine-Dalgarno motif among prokaryote genomes A Pallejà, S García-Vallvé, A Romeu BMC genomics 10, 1-13, 2009 | 9 | 2009 |
| The Influence of FUT2 and FUT3 Polymorphisms and Nasopharyngeal Microbiome on Respiratory Infections in Breastfed Bangladeshi Infants from the Microbiota … A Binia, L Siegwald, S Sultana, M Shevlyakova, G Lefebvre, F Foata, ... Msphere 6 (6), e00686-21, 2021 | 7 | 2021 |
| An extensively hydrolyzed formula supplemented with two human milk oligosaccharides modifies the fecal microbiome and metabolome in infants with cow’s milk protein allergy CL Boulangé, HK Pedersen, FP Martin, L Siegwald, A Pallejà Caro, ... International Journal of Molecular Sciences 24 (14), 11422, 2023 | 6 | 2023 |
| In Silico Prediction of the Origin of Replication among Bacteria: A Case Study of Bacteroides thetaiotaomicron A Pallejà, E Guzman, S Garcia-Vallvé, A Romeu OMICS A Journal of Integrative Biology 12 (3), 201-210, 2008 | 6 | 2008 |
| Microbiome compositions and resistome levels after antibiotic treatment of critically ill patients: an observational cohort study KL Nielsen, MH Olsen, A Pallejá, SR Ebdrup, N Sørensen, O Lukjancenko, ... Microorganisms 9 (12), 2542, 2021 | 4 | 2021 |
| Vaginal microbiome following orally administered probiotic FB Hertz, JB Holm, A Pallejá, MK Björnsdóttir, LS Mikkelsen, ... Apmis 130 (10), 605-611, 2022 | 2 | 2022 |
| An extensively hydrolyzed formula supplemented with two human milk oligosaccharides (HMO) shapes the fecal microbiome and metabolome in infants with cow’s milk protein allergy C Boulange, FP Martin, N Sprenger, B Berger, L Siegwald, HK Pedersen, ... ALLERGY 78, 32-33, 2023 | | 2023 |
| Meta-analysis of fecal metagenomes reveals global microbial signatures that are specific for colorectal cancer S Yachida, AY Voigt, A Palleja, R Ponnudurai, S Sunagawa, LP Coelho, ... | | 2019 |
| HOODS: finding context-specific neighborhoods of proteins, chemicals and diseases A Palleja, LJ Jensen PeerJ 3, e1057, 2015 | | 2015 |
