Distinct molecular profiles of skull bone marrow in health and neurological disorders ZI Kolabas, LB Kuemmerle, R Perneczky, B Förstera, S Ulukaya, M Ali, ... Cell 186 (17), 3706-3725. e29, 2023 | 74 | 2023 |
Rapid three-dimensional multiparametric MRI with quantitative transient-state imaging PA Gómez, M Cencini, M Golbabaee, RF Schulte, C Pirkl, I Horvath, ... Scientific reports 10 (1), 13769, 2020 | 65 | 2020 |
Whole-body cellular mapping in mouse using standard IgG antibodies H Mai, J Luo, L Hoeher, R Al-Maskari, I Horvath, Y Chen, F Kofler, ... Nature Biotechnology 42 (4), 617-627, 2024 | 58 | 2024 |
SARS-CoV-2 spike protein accumulation in the skull-meninges-brain axis: potential implications for long-term neurological complications in post-COVID-19 Z Rong, H Mai, S Kapoor, VG Puelles, J Czogalla, J Schädler, J Vering, ... BioRxiv, 2023.04. 04.535604, 2023 | 24 | 2023 |
The brain tumor segmentation (brats) challenge 2023: Local synthesis of healthy brain tissue via inpainting F Kofler, F Meissen, F Steinbauer, R Graf, E Oswald, E de da Rosa, HB Li, ... arXiv preprint arXiv:2305.08992, 2023 | 19 | 2023 |
Deciphering sources of PET signals in the tumor microenvironment of glioblastoma at cellular resolution LM Bartos, SV Kirchleitner, ZI Kolabas, S Quach, A Beck, J Lorenz, ... Science Advances 9 (43), eadi8986, 2023 | 13 | 2023 |
Metgan: Generative tumour inpainting and modality synthesis in light sheet microscopy I Horvath, J Paetzold, O Schoppe, R Al-Maskari, I Ezhov, S Shit, H Li, ... Proceedings of the IEEE/CVF Winter Conference on Applications of Computer …, 2022 | 12 | 2022 |
blob loss: Instance Imbalance Aware Loss Functions for Semantic Segmentation F Kofler, S Shit, I Ezhov, L Fidon, I Horvath, R Al-Maskari, HB Li, H Bhatia, ... International Conference on Information Processing in Medical Imaging, 755-767, 2023 | 11 | 2023 |
Whole mouse body histology using standard IgG antibodies H Mai, J Luo, L Hoeher, R Al-Maskari, I Horvath, JC Paetzold, M Todorov, ... bioRxiv, 2023.02. 17.528921, 2023 | 7 | 2023 |
Deep quality estimation: Creating surrogate models for human quality ratings F Kofler, I Ezhov, L Fidon, I Horvath, E de la Rosa, J LaMaster, H Li, ... International MICCAI Brainlesion Workshop, 3-13, 2022 | 5 | 2022 |
Persistence of spike protein at the skull-meninges-brain axis may contribute to the neurological sequelae of COVID-19 Z Rong, H Mai, G Ebert, S Kapoor, VG Puelles, J Czogalla, S Hu, J Su, ... Cell Host & Microbe 32 (12), 2112-2130. e10, 2024 | 2 | 2024 |
On the pitfalls of deep image segmentation for lightsheet microscopy R Al-Maskari, JC Paetzold, I Horvath, A Erturk Medical Imaging with Deep Learning, 2021 | 2 | 2021 |
Deep Learning and 3D Imaging Reveal Whole-Body Alterations in Obesity D Kaltenecker, I Horvath, R Al-Maskari, ZI Kolabas, Y Chen, L Hoeher, ... bioRxiv, 2024.08. 18.608300, 2024 | 1 | 2024 |
Nanocarrier imaging at single-cell resolution across entire mouse bodies with deep learning J Luo, M Molbay, Y Chen, I Horvath, K Kadletz, B Kick, S Zhao, ... Nature Biotechnology, 1-14, 2025 | | 2025 |
SELMA3D challenge: Self-supervised learning for 3D light-sheet microscopy image segmentation Y Chen, R Al-Maskari, I Horvath, M Ali, L Höher, K Yang, Z Lin, Z Zhai, ... arXiv preprint arXiv:2501.03880, 2025 | | 2025 |
MetGAN-based Data Augmentation for Improved Metastasis Segmentation in Light-Sheet Microscopy I Horvath, JC Paetzold, R Al-Maskari, A Ertürk, BH Menze | | 2022 |
VALDO challenge submission-task 2: dawai blob loss for microbleeds segmentation benchmark FS Kofler, S Shit, I Ezhov, I Horvath, R Al-Maskari, J Kirschke, C Zimmer, ... | | |
VALDO challenge submission-task 3-dawai. blob loss for lacune segmentation benchmark FS Kofler, I Ezhov, I Horvath, R Al-Maskari, S Shit, J Kirschke, C Zimmer, ... | | |
Synchronizing dimension reduction and parameter inference in 3D multiparametric MRI: A hybrid dual-pathway neural network approach CM Pirkl, I Horvath, S Endt, G Buonincontri, MI Menzel, PA Gómez, ... | | |