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Jinfeng Zhang
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Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types
T Ryba, I Hiratani, J Lu, M Itoh, M Kulik, J Zhang, TC Schulz, AJ Robins, ...
Genome research 20 (6), 761-770, 2010
6822010
Reactivity of thioredoxin as a protein thiol-disulfide oxidoreductase.
Z Cheng, J Zhang, DP Ballou, CH Williams Jr
Chemical reviews 111 (9), 5768, 2011
1342011
Replication timing: a fingerprint for cell identity and pluripotency
T Ryba, I Hiratani, T Sasaki, D Battaglia, M Kulik, J Zhang, S Dalton, ...
PLoS Comput Biol 7 (10), e1002225, 2011
1032011
Differentially expressed transcripts and dysregulated signaling pathways and networks in African American breast cancer
PA Stewart, J Luks, MD Roycik, QXA Sang, J Zhang
PloS one 8 (12), e82460, 2013
1022013
Bayesian inference of protein–protein interactions from biological literature
R Chowdhary, J Zhang, JS Liu
Bioinformatics 25 (12), 1536-1542, 2009
1012009
Modeling Recurrence for Transformer
J Hao, X Wang, B Yang, L Wang, J Zhang, Z Tu
arXiv preprint arXiv:1904.03092, 2019
922019
Differential Nuclease Sensitivity Profiling of Chromatin Reveals Biochemical Footprints Coupled to Gene Expression and Functional DNA Elements in Maize
DL Vera, TF Madzima, JD Labonne, MP Alam, GG Hoffman, ...
The Plant Cell 26 (10), 3883-3893, 2014
882014
Biopolymer structure simulation and optimization via fragment regrowth Monte Carlo
J Zhang, SC Kou, JS Liu
The Journal of chemical physics 126 (22), 225101, 2007
862007
Consumer responses towards home energy financial incentives: A survey-based study
T Zhao, L Bell, MW Horner, J Sulik, J Zhang
Energy Policy, 2012
842012
On side-chain conformational entropy of proteins
J Zhang, JS Liu
PLoS Comput Biol 2 (12), e168, 2006
762006
Origin of scaling behavior of protein packing density: A sequential Monte Carlo study of compact long chain polymers
J Zhang, R Chen, C Tang, J Liang
The Journal of chemical physics 118 (13), 6102-6109, 2003
742003
ProDCoNN: Protein design using a convolutional neural network
Y Zhang, Y Chen, C Wang, CC Lo, X Liu, W Wu, J Zhang
Proteins: Structure, Function, and Bioinformatics 88 (7), 819-829, 2020
712020
Fast protein loop sampling and structure prediction using distance-guided sequential chain-growth Monte Carlo method
K Tang, J Zhang, J Liang
PLoS Comput Biol 10 (4), e1003539, 2014
682014
Multi-Granularity Self-Attention for Neural Machine Translation
J Hao, X Wang, S Shi, J Zhang, Z Tu
arXiv preprint arXiv:1909.02222, 2019
672019
A mathematical framework for protein structure comparison
W Liu, A Srivastava, J Zhang
PLoS Comput Biol 7 (2), e1001075, 2011
632011
Tumoral expression of drug and xenobiotic metabolizing enzymes in breast cancer patients of different ethnicities with implications to personalized medicine
Y Li, A Steppi, Y Zhou, F Mao, PC Miller, MM He, T Zhao, Q Sun, J Zhang
Scientific reports 7 (1), 4747, 2017
582017
Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine
R Islamaj Doğan, S Kim, A Chatr-aryamontri, CH Wei, DC Comeau, ...
Database 2019, 2019
552019
Extracting chemical–protein interactions from literature using sentence structure analysis and feature engineering
PY Lung, Z He, T Zhao, D Yu, J Zhang
Database 2019, 2019
522019
Immune landscape of human prostate cancer: immune evasion mechanisms and biomarkers for personalized immunotherapy
MJ Bou-Dargham, L Sha, QXA Sang, J Zhang
BMC cancer 20 (1), 1-10, 2020
502020
The regulatory landscape of early maize inflorescence development
RK Parvathaneni, E Bertolini, M Shamimuzzaman, DL Vera, PY Lung, ...
Genome biology 21 (1), 1-33, 2020
482020
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