Roland Dunbrack
Roland Dunbrack
Fox Chase Cancer Center
Bestätigte E-Mail-Adresse bei - Startseite
Zitiert von
Zitiert von
All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of Proteins
AD MacKerell Jr, D Bashford, M Bellott, RL Dunbrack Jr, JD Evanseck, ...
The journal of physical chemistry B 102 (18), 3586-3616, 1998
PISCES: a protein sequence culling server
G Wang, RL Dunbrack Jr
Bioinformatics 19 (12), 1589-1591, 2003
Improved prediction of protein side‐chain conformations with SCWRL4
GG Krivov, MV Shapovalov, RL Dunbrack Jr
Proteins: Structure, Function, and Bioinformatics 77 (4), 778-795, 2009
A graph‐theory algorithm for rapid protein side‐chain prediction
AA Canutescu, AA Shelenkov, RL Dunbrack Jr
Protein science 12 (9), 2001-2014, 2003
PONDR-FIT: a meta-predictor of intrinsically disordered amino acids
B Xue, RL Dunbrack, RW Williams, AK Dunker, VN Uversky
Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1804 (4), 996-1010, 2010
The Rosetta all-atom energy function for macromolecular modeling and design
RF Alford, A Leaver-Fay, JR Jeliazkov, MJ O’Meara, FP DiMaio, H Park, ...
Journal of chemical theory and computation 13 (6), 3031-3048, 2017
Backbone-dependent rotamer library for proteins application to side-chain prediction
RL Dunbrack Jr, M Karplus
Journal of molecular biology 230 (2), 543-574, 1993
Bayesian statistical analysis of protein side‐chain rotamer preferences
RL Dunbrack Jr, FE Cohen
Protein science 6 (8), 1661-1681, 1997
A smoothed backbone-dependent rotamer library for proteins derived from adaptive kernel density estimates and regressions
MV Shapovalov, RL Dunbrack
Structure 19 (6), 844-858, 2011
Rotamer libraries in the 21st century
RL Dunbrack Jr
Current opinion in structural biology 12 (4), 431-440, 2002
Formation of MacroH2A-containing senescence-associated heterochromatin foci and senescence driven by ASF1a and HIRA
R Zhang, MV Poustovoitov, X Ye, HA Santos, W Chen, SM Daganzo, ...
Developmental cell 8 (1), 19-30, 2005
All-atom empirical potential for molecular modeling and dynamics studies of proteins
AD MacKerrell, D Bashford, M Bellott, RL Dunbrack, JD Evanseck, ...
J. Phys. Chem. B 102 (18), 3586-3616, 1998
Prediction of protein side-chain rotamers from a backbone-dependent rotamer library: a new homology modeling tool
MJ Bower, FE Cohen, RL Dunbrack Jr
Journal of molecular biology 267 (5), 1268-1282, 1997
Cyclic coordinate descent: A robotics algorithm for protein loop closure
AA Canutescu, RL Dunbrack Jr
Protein science 12 (5), 963-972, 2003
Macromolecular modeling and design in Rosetta: recent methods and frameworks
JK Leman, BD Weitzner, SM Lewis, J Adolf-Bryfogle, N Alam, RF Alford, ...
Nature methods 17 (7), 665-680, 2020
Aurora A kinase (AURKA) in normal and pathological cell division
AS Nikonova, I Astsaturov, IG Serebriiskii, RL Dunbrack, EA Golemis
Cellular and Molecular Life Sciences 70, 661-687, 2013
Conformational analysis of the backbone-dependent rotamer preferences of protein sidechains
RL Dunbrack Jr, M Karplus
Nature structural biology 1 (5), 334-340, 1994
Defects in DNA repair genes predict response to neoadjuvant cisplatin-based chemotherapy in muscle-invasive bladder cancer
ER Plimack, RL Dunbrack, TA Brennan, MD Andrake, Y Zhou, ...
European urology 68 (6), 959-967, 2015
A new clustering of antibody CDR loop conformations
B North, A Lehmann, RL Dunbrack Jr
Journal of molecular biology 406 (2), 228-256, 2011
PISCES: recent improvements to a PDB sequence culling server
G Wang, RL Dunbrack
Nucleic acids research 33 (suppl_2), W94-W98, 2005
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