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Anup Kumar Halder
Anup Kumar Halder
Assistant Professor(Research), Warsaw University of Technology, Warsaw, Poland
Bestätigte E-Mail-Adresse bei pw.edu.pl
Titel
Zitiert von
Zitiert von
Jahr
Bio-inspired cryptosystem with DNA cryptography and neural networks
S Basu, M Karuppiah, M Nasipuri, AK Halder, N Radhakrishnan
Journal of Systems Architecture 94, 24-31, 2019
422019
Drug repurposing for COVID-19 using computational screening: Is Fostamatinib/R406 a potential candidate?
S Saha, AK Halder, SS Bandyopadhyay, P Chatterjee, M Nasipuri, ...
Methods 203, 564-574, 2022
29*2022
Review of computational methods for virus–host protein interaction prediction: a case study on novel Ebola–human interactions
AK Halder, P Dutta, M Kundu, S Basu, M Nasipuri
Briefings in functional genomics 17 (6), 381-391, 2018
262018
Aggregated Network Centrality Shows Non-Random Structure of Genomic and Proteomic Networks
AK Halder, M Denkiewicz, K Sengupta, S Basu, D Plewczynski
Methods (https://doi.org/10.1016/j.ymeth.2019.11.006), 2019
172019
HdK-means: Hadoop based parallel K-means clustering for big data
SS Bandyopadhyay, AK Halder, P Chatterjee, M Nasipuri, S Basu
2017 IEEE Calcutta Conference (CALCON), 452-456, 2017
122017
3gClust: Human Protein Cluster Analysis
AK Halder, P Chatterjee, M Nasipuri, D Plewczynski, S Basu
IEEE/ACM transactions on computational biology and bioinformatics 16 (6 …, 2018
92018
Computational modeling of human-nCoV protein-protein interaction network
SB Sovan Saha, Anup Kumar Halder, Soumyendu Sekhar Bandyopadhyay, Piyali ...
Methods (https://doi.org/10.1016/j.ymeth.2021.12.003), 2021
7*2021
ML-DTD: machine learning-based drug target discovery for the potential treatment of COVID-19
S Saha, P Chatterjee, AK Halder, M Nasipuri, S Basu, D Plewczynski
Vaccines 10 (10), 1643, 2022
6*2022
JUPPI: A multi-level feature based method for PPI prediction and a refined strategy for performance assessment
AK Halder, SS Bandyopadhyay, P Chatterjee, M Nasipuri, D Plewczynski, ...
IEEE/ACM Transactions on Computational Biology and Bioinformatics 19 (1 …, 2022
62022
A survey on Ebola genome and current trends in computational research on the Ebola virus
P Dutta, AK Halder, S Basu, M Kundu
Briefings in Functional Genomics 17 (6), 374-380, 2018
62018
S-palmitoylation of synaptic proteins as a novel mechanism underlying sex-dependent differences in neuronal plasticity
M Zaręba-Kozioł, A Bartkowiak-Kaczmarek, M Roszkowska, K Bijata, ...
International Journal of Molecular Sciences 22 (12), 6253, 2021
52021
PFP-GO: Integrating protein sequence, domain and Protein-Protein Interaction Information for Protein Function Prediction using Ranked GO terms
K Sengupta, S Saha, A Kumar Halder, P Chatterjee, M Nasipuri, S Basu, ...
Frontiers in Genetics, 2635, 2022
42022
Assessment of GO-based protein interaction affinities in the large-scale human–coronavirus family interactome
SS Bandyopadhyay, AK Halder, S Saha, P Chatterjee, M Nasipuri, S Basu
Vaccines 11 (3), 549, 2023
32023
Prediction of thyroid cancer genes using an ensemble of post translational modification, semantic and structural similarity based clustering results
AK Halder, P Dutta, M Kundu, M Nasipuri, S Basu
International Conference on Pattern Recognition and Machine Intelligence …, 2017
32017
Prediction of chromatin looping using deep hybrid learning (DHL)
M Chiliński, AK Halder, D Plewczynski
Quantitative Biology 11 (2), 155-162, 2023
22023
Rule-Based Pruning and In Silico Identification of Essential Proteins in Yeast PPIN
A Banik, S Podder, S Saha, P Chatterjee, AK Halder, M Nasipuri, S Basu, ...
Cells 11 (17), 2648, 2022
22022
RFCM-PALM: In-Silico Prediction of S-Palmitoylation Sites in the Synaptic Proteins for Male/Female Mouse Data
SS Bandyopadhyay, AK Halder, M Zaręba-Kozioł, ...
International Journal of Molecular Sciences 22 (18), 9901, 2021
22021
SeqPIP-2020: Sequence based Protein Interaction Prediction Contest
AK Halder, AF Mollah, P Chatterjee, DK Kole, S Basu, D Plewczyński
bioRxiv, 2020.11. 12.380774, 2020
22020
FuzzyPPI: Large-Scale Interaction of Human Proteome at Fuzzy Semantic Space
AK Halder, SS Bandyopadhyay, W Jedrzejewski, S Basu, J Sroka
IEEE Transactions on Big Data, 2024
2024
ccLoopER: Deep Prediction of CTCF and cohesin Mediated Chromatin looping Using DNA Transformer Model
AK Halder, A Agarwal, S Korsak, K Jodkowska, D Plewczynski
International Conference on Pattern Recognition and Machine Intelligence …, 2023
2023
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