Anna Sophia Kamenik
Anna Sophia Kamenik
General, Inorganic and Theoretical Chemistry, University of Innsbruck
Verified email at uibk.ac.at - Homepage
Title
Cited by
Cited by
Year
Characterizing the diversity of the CDR-H3 loop conformational ensembles in relationship to antibody binding properties
ML Fernández-Quintero, JR Loeffler, J Kraml, U Kahler, AS Kamenik, ...
Frontiers in immunology 9, 3065, 2019
282019
Peptidic macrocycles-conformational sampling and thermodynamic characterization
AS Kamenik, U Lessel, JE Fuchs, T Fox, KR Liedl
Journal of chemical information and modeling 58 (5), 982-992, 2018
282018
Structure of the major apple allergen Mal d 1
L Ahammer, S Grutsch, AS Kamenik, KR Liedl, M Tollinger
Journal of agricultural and food chemistry 65 (8), 1606-1612, 2017
252017
Localization of millisecond dynamics: dihedral entropy from accelerated MD
AS Kamenik, U Kahler, JE Fuchs, KR Liedl
Journal of chemical theory and computation 12 (8), 3449-3455, 2016
172016
Solvation free energy as a measure of hydrophobicity: application to serine protease binding interfaces
J Kraml, AS Kamenik, F Waibl, M Schauperl, KR Liedl
Journal of chemical theory and computation 15 (11), 5872-5882, 2019
122019
Conformational flexibility differentiates naturally occurring Bet v 1 isoforms
S Grutsch, JE Fuchs, L Ahammer, AS Kamenik, KR Liedl, M Tollinger
International journal of molecular sciences 18 (6), 1192, 2017
92017
pH-Dependent protonation of the Phl p 6 pollen allergen studied by NMR and cpH-aMD
F Hofer, V Dietrich, AS Kamenik, M Tollinger, KR Liedl
Journal of chemical theory and computation 15 (10), 5716-5726, 2019
52019
Sodium-induced population shift drives activation of thrombin
U Kahler, AS Kamenik, J Kraml, KR Liedl
Scientific reports 10 (1), 1-10, 2020
42020
Conformational selection of allergen-antibody complexes—surface plasticity of paratopes and epitopes
ML Fernández-Quintero, JR Loeffler, F Waibl, AS Kamenik, F Hofer, ...
Protein Engineering, Design and Selection 32 (11), 513-523, 2019
32019
Protein-protein binding as a two-step mechanism: Preselection of encounter poses during the binding of BPTI and trypsin
U Kahler, AS Kamenik, F Waibl, J Kraml, KR Liedl
Biophysical journal 119 (3), 652-666, 2020
22020
Macrocycle Cell Permeability Measured by Solvation Free Energies in Polar and Apolar Environments
AS Kamenik, J Kraml, F Hofer, F Waibl, PK Quoika, U Kahler, M Schauperl, ...
Journal of chemical information and modeling 60 (7), 3508-3517, 2020
22020
Catalytic Site pKa Values of Aspartic, Cysteine, and Serine Proteases: Constant pH MD Simulations
F Hofer, J Kraml, U Kahler, AS Kamenik, KR Liedl
Journal of chemical information and modeling 60 (6), 3030-3042, 2020
22020
Dynamics rationalize proteolytic susceptibility of the major birch pollen allergen Bet v 1
AS Kamenik, F Hofer, PH Handle, KR Liedl
Frontiers in molecular biosciences 7, 18, 2020
22020
In silico Design of Phl p 6 Variants With Altered Fold-Stability Significantly Impacts Antigen Processing, Immunogenicity and Immune Polarization
P Winter, S Stubenvoll, S Scheiblhofer, IA Joubert, L Strasser, C Briganser, ...
Frontiers in immunology 11, 1824, 2020
12020
Solvation Thermodynamics in Different Solvents: Water–Chloroform Partition Coefficients from Grid Inhomogeneous Solvation Theory
J Kraml, F Hofer, AS Kamenik, F Waibl, U Kahler, M Schauperl, KR Liedl
Journal of chemical information and modeling 60 (8), 3843-3853, 2020
12020
Inverse relation between structural flexibility and IgE reactivity of Cor a 1 hazelnut allergens
S Führer, AS Kamenik, R Zeindl, B Nothegger, F Hofer, N Reider, ...
Scientific reports 11 (1), 1-14, 2021
2021
Conformational Ensembles of Antibodies Determine Their Hydrophobicity
F Waibl, ML Fernández-Quintero, AS Kamenik, J Kraml, F Hofer, ...
Biophysical Journal, 2020
2020
Polarizable and non-polarizable force fields: Protein folding, unfolding, and misfolding
AS Kamenik, PH Handle, F Hofer, U Kahler, J Kraml, KR Liedl
The Journal of Chemical Physics 153 (18), 185102, 2020
2020
Thermosensitive Hydration of Four Acrylamide-Based Polymers in Coil and Globule Conformations
PK Quoika, M Podewitz, Y Wang, AS Kamenik, JR Loeffler, KR Liedl
The Journal of Physical Chemistry B 124 (43), 9745-9756, 2020
2020
Profiling selectivity of chagasin mutants towards cysteine proteases cruzain or cathepsin L through molecular dynamics simulations
NP Toman, AS Kamenik, LH Santos, F Hofer, KR Liedl, RS Ferreira
Journal of Biomolecular Structure and Dynamics, 1-13, 2020
2020
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Articles 1–20