| An integrated encyclopedia of DNA elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57, 2012 | 13907 | 2012 |
| The zebrafish reference genome sequence and its relationship to the human genome K Howe, MD Clark, CF Torroja, J Torrance, C Berthelot, M Muffato, ... Nature 496 (7446), 498-503, 2013 | 5088 | 2013 |
| Ensembl 2018 DR Zerbino, P Achuthan, W Akanni, MR Amode, D Barrell, J Bhai, K Billis, ... Nucleic acids research 46 (D1), D754-D761, 2018 | 3038 | 2018 |
| GENCODE reference annotation for the human and mouse genomes A Frankish, M Diekhans, AM Ferreira, R Johnson, I Jungreis, J Loveland, ... Nucleic acids research 47 (D1), D766-D773, 2019 | 2604 | 2019 |
| Ensembl 2020 AD Yates, P Achuthan, W Akanni, J Allen, J Allen, J Alvarez-Jarreta, ... Nucleic acids research 48 (D1), D682-D688, 2020 | 1743 | 2020 |
| Ensembl 2021 KL Howe, P Achuthan, J Allen, J Allen, J Alvarez-Jarreta, MR Amode, ... Nucleic acids research 49 (D1), D884-D891, 2021 | 1480 | 2021 |
| Analyses of pig genomes provide insight into porcine demography and evolution MAM Groenen, AL Archibald, H Uenishi, CK Tuggle, Y Takeuchi, ... Nature 491 (7424), 393-398, 2012 | 1480 | 2012 |
| The DNA sequence of the human X chromosome MT Ross, DV Grafham, AJ Coffey, S Scherer, K McLay, D Muzny, ... Nature 434 (7031), 325-337, 2005 | 1388 | 2005 |
| Ensembl 2022 F Cunningham, JE Allen, J Allen, J Alvarez-Jarreta, MR Amode, ... Nucleic acids research 50 (D1), D988-D995, 2022 | 1374 | 2022 |
| Ensembl 2019 F Cunningham, P Achuthan, W Akanni, J Allen, MR Amode, IM Armean, ... Nucleic acids research 47 (D1), D745-D751, 2019 | 981 | 2019 |
| GENCODE 2021 A Frankish, M Diekhans, I Jungreis, J Lagarde, JE Loveland, JM Mudge, ... Nucleic acids research 49 (D1), D916-D923, 2021 | 748 | 2021 |
| The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes KD Pruitt, J Harrow, RA Harte, C Wallin, M Diekhans, DR Maglott, ... Genome research 19 (7), 1316-1323, 2009 | 629 | 2009 |
| The DNA sequence and analysis of human chromosome 6 AJ Mungall, SA Palmer, SK Sims, CA Edwards, JL Ashurst, L Wilming, ... Nature 425 (6960), 805-811, 2003 | 535 | 2003 |
| The DNA sequence and biological annotation of human chromosome 1 SG Gregory, KF Barlow, KE McLay, R Kaul, D Swarbreck, A Dunham, ... Nature 441 (7091), 315-321, 2006 | 462 | 2006 |
| Ensembl 2023 FJ Martin, MR Amode, A Aneja, O Austine-Orimoloye, AG Azov, I Barnes, ... Nucleic acids research 51 (D1), D933-D941, 2023 | 291 | 2023 |
| Mendelian randomization E Birney Cold Spring Harbor perspectives in medicine, a041302, 2021 | 232 | 2021 |
| Structural and functional annotation of the porcine immunome HD Dawson, JE Loveland, G Pascal, JGR Gilbert, H Uenishi, KM Mann, ... BMC genomics 14, 1-16, 2013 | 195 | 2013 |
| DNA sequence and analysis of human chromosome 9 SJ Humphray, K Oliver, AR Hunt, RW Plumb, JE Loveland, KL Howe, ... Nature 429 (6990), 369-374, 2004 | 195 | 2004 |
| Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci J Lilue, AG Doran, IT Fiddes, M Abrudan, J Armstrong, R Bennett, ... Nature genetics 50 (11), 1574-1583, 2018 | 192 | 2018 |
| A joint NCBI and EMBL-EBI transcript set for clinical genomics and research J Morales, S Pujar, JE Loveland, A Astashyn, R Bennett, A Berry, E Cox, ... Nature 604 (7905), 310-315, 2022 | 189 | 2022 |
