Quantitative proteomic analysis of distinct mammalian Mediator complexes using normalized spectral abundance factors AC Paoletti, TJ Parmely, C Tomomori-Sato, S Sato, D Zhu, RC Conaway, ... Proceedings of the National Academy of Sciences 103 (50), 18928-18933, 2006 | 554 | 2006 |
Targeting of GFP to newborn rods by Nrl promoter and temporal expression profiling of flow-sorted photoreceptors M Akimoto, H Cheng, D Zhu, JA Brzezinski, R Khanna, E Filippova, ... Proceedings of the National Academy of Sciences 103 (10), 3890-3895, 2006 | 367 | 2006 |
Stem cell aging is controlled both intrinsically and extrinsically in the Drosophila ovary L Pan, S Chen, C Weng, G Call, D Zhu, H Tang, N Zhang, T Xie Cell stem cell 1 (4), 458-469, 2007 | 223 | 2007 |
Cse4 is part of an octameric nucleosome in budding yeast R Camahort, M Shivaraju, M Mattingly, B Li, S Nakanishi, D Zhu, ... Molecular cell 35 (6), 794-805, 2009 | 192 | 2009 |
Covid-mobilexpert: On-device covid-19 screening using snapshots of chest x-ray X Li, C Li, D Zhu arXiv preprint arXiv:2004.03042, 2020 | 132* | 2020 |
Comparative analysis of clustering methods for microarray data D Zhu, ML Dequeéant, H Li Analysis of microarray data: a network-based approach, Weinheim, Germany, 2008 | 116* | 2008 |
Structural comparison of metabolic networks in selected single cell organisms D Zhu, ZS Qin BMC bioinformatics 6 (1), 1-12, 2005 | 102 | 2005 |
Transcriptome and targetome analysis in MIR155 expressing cells using RNA-seq G Xu, C Fewell, C Taylor, N Deng, D Hedges, X Wang, K Zhang, M Lacey, ... Rna 16 (8), 1610-1622, 2010 | 86 | 2010 |
Network constrained clustering for gene microarray data D Zhu, AO Hero, H Cheng, R Khanna, A Swaroop Bioinformatics 21 (21), 4014-4020, 2005 | 85 | 2005 |
SAMMate: a GUI tool for processing short read alignments in SAM/BAM format G Xu, N Deng, Z Zhao, T Judeh, E Flemington, D Zhu Source code for biology and medicine 6, 1-11, 2011 | 73 | 2011 |
Safs: A deep feature selection approach for precision medicine MZ Nezhad, D Zhu, X Li, K Yang, P Levy 2016 IEEE international conference on bioinformatics and biomedicine (BIBM …, 2016 | 67 | 2016 |
Text classification with topic-based word embedding and convolutional neural networks H Xu, M Dong, D Zhu, A Kotov, AI Carcone, S Naar-King Proceedings of the 7th ACM International Conference on Bioinformatics …, 2016 | 63 | 2016 |
Quantitative and qualitative RNA-Seq-based evaluation of Epstein-Barr virus transcription in type I latency Burkitt's lymphoma cells Z Lin, G Xu, N Deng, C Taylor, D Zhu, EK Flemington Journal of virology 84 (24), 13053-13058, 2010 | 59 | 2010 |
A deep active survival analysis approach for precision treatment recommendations: application of prostate cancer MZ Nezhad, N Sadati, K Yang, D Zhu Expert Systems with Applications 115, 16-26, 2019 | 58 | 2019 |
High throughput screening of co-expressed gene pairs with controlled false discovery rate (FDR) and minimum acceptable strength (MAS) D Zhu, AO Hero, ZS Qin, A Swaroop Journal of Computational Biology 12 (7), 1029-1045, 2005 | 58 | 2005 |
Deep learning protocol for improved photoacoustic brain imaging R Manwar, X Li, S Mahmoodkalayeh, E Asano, D Zhu, K Avanaki Journal of biophotonics 13 (10), e202000212, 2020 | 54 | 2020 |
A survey of computational approaches to reconstruct and partition biological networks L Acharya, T Judeh, D Zhu Statistical and Machine Learning Approaches for Network Analysis, 1-43, 2012 | 53* | 2012 |
TEAK: Topology Enrichment Analysis frameworK for detecting activated biological subpathways D Judeh, T, Johnson, C, Kumar, A, and Zhu Nucleic Acids Research, 2012 | 48* | 2012 |
COVID-MobileXpert: On-device COVID-19 patient triage and follow-up using chest X-rays X Li, C Li, D Zhu 2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2020 | 46 | 2020 |
Explainable recommendation via interpretable feature mapping and evaluation of explainability D Pan, X Li, X Li, D Zhu arXiv preprint arXiv:2007.06133, 2020 | 39 | 2020 |