Julie Ferreira de Carvalho
Julie Ferreira de Carvalho
Postdoctoral fellow
Bestätigte E-Mail-Adresse bei nioo.knaw.nl
Titel
Zitiert von
Zitiert von
Jahr
The first complete chloroplast genome of the Genistoid legume Lupinus luteus: evidence for a novel major lineage-specific rearrangement and new insights …
GE Martin, M Rousseau-Gueutin, S Cordonnier, O Lima, ...
Annals of botany 113 (7), 1197-1210, 2014
722014
Transcriptome de novo assembly from next-generation sequencing and comparative analyses in the hexaploid salt marsh species Spartina maritima and Spartina alterniflora (Poaceae)
JF De Carvalho, J Poulain, C Da Silva, P Wincker, S Michon-Coudouel, ...
Heredity 110 (2), 181-193, 2013
572013
Small RNAs reflect grandparental environments in apomictic dandelion
L Morgado, V Preite, C Oplaat, S Anava, J Ferreira de Carvalho, ...
Molecular biology and evolution 34 (8), 2035-2040, 2017
222017
Recent and dynamic transposable elements contribute to genomic divergence under asexuality
JF de Carvalho, V de Jager, TP van Gurp, NCAM Wagemaker, ...
BMC genomics 17 (1), 1-12, 2016
212016
Haplotype Detection from Next-Generation Sequencing in High-Ploidy-Level Species: 45S rDNA Gene Copies in the Hexaploid Spartina maritima
J Boutte, B Aliaga, O Lima, J Ferreira de Carvalho, A Ainouche, J Macas, ...
G3: Genes, Genomes, Genetics 6 (1), 29-40, 2016
212016
Reference Transcriptomes and Detection of Duplicated Copies in Hexaploid and Allododecaploid Spartina Species (Poaceae)
J Boutte, J Ferreira de Carvalho, M Rousseau-Gueutin, J Poulain, ...
Genome biology and evolution 8 (9), 3030-3044, 2016
202016
Cytonuclear interactions remain stable during allopolyploid evolution despite repeated whole‐genome duplications in Brassica
J Ferreira de Carvalho, J Lucas, G Deniot, C Falentin, O Filangi, M Gilet, ...
The Plant Journal 98 (3), 434-447, 2019
162019
Gene expression variation in natural populations of hexaploid and allododecaploid Spartina species (Poaceae)
JF de Carvalho, J Boutte, P Bourdaud, H Chelaifa, K Ainouche, A Salmon, ...
Plant Systematics and Evolution 303 (8), 1061-1079, 2017
162017
Heritable gene expression differences between apomictic clone members in Taraxacum officinale: Insights into early stages of evolutionary divergence in asexual plants
JF de Carvalho, C Oplaat, N Pappas, M Derks, D de Ridder, ...
BMC genomics 17 (1), 1-13, 2016
162016
Exploring the genome of the salt-marsh Spartina maritima (Poaceae, Chloridoideae) through BAC end sequence analysis
JF De Carvalho, H Chelaifa, J Boutte, J Poulain, A Couloux, P Wincker, ...
Plant molecular biology 83 (6), 591-606, 2013
142013
Chapter The Intertwined Chloroplast and Nuclear Genome Coevolution in Plants
M Rousseau-Gueutin, G Martin, J Ferreira de Carvalho, J Keller, ...
InTechOpen, 2018
122018
Long-read assembly of the Brassica napus reference genome Darmor-bzh
M Rousseau-Gueutin, C Belser, C Da Silva, G Richard, B Istace, ...
GigaScience 9 (12), giaa137, 2020
112020
Persistence, dispersal and genetic evolution of recently formed Spartina homoploid hybrids and allopolyploids in Southern England
D Huska, IJ Leitch, JF De Carvalho, AR Leitch, A Salmon, M Ainouche, ...
Biological Invasions 18 (8), 2137-2151, 2016
112016
Intergenerational environmental effects: functional signals in offspring transcriptomes and metabolomes after parental jasmonic acid treatment in apomictic dandelion
KJF Verhoeven, EH Verbon, TP van Gurp, C Oplaat, ...
new phytologist 217 (2), 871-882, 2018
102018
Transcriptome response of the foundation plant Spartina alterniflora to the Deepwater Horizon oil spill
M Alvarez, J Ferreira de Carvalho, A Salmon, ML Ainouche, ...
Molecular ecology 27 (14), 2986-3000, 2018
72018
Transcriptome response to the Deepwater Horizon oil spill identifies novel candidate genes for oil tolerance in natural populations of the foundation plant Spartina alterniflora
M Alvarez, J Ferreira de Carvalho, A Salmon, ML Ainouche, ...
Molecular Ecology doi 10, 2018
62018
Genome size variation and comparative genomics reveal intraspecific diversity in Brassica rapa
J Boutte, L Maillet, T Chaussepied, S Letort, JM Aury, C Belser, F Boideau, ...
Frontiers in plant science 11, 2020
52020
Genome merger as evolutionary springboard: Insights from recurrent hybridization and polyploidy in Spartina
ML Aïnouche, H Chelaifa, M Rousseau-Gueutin, J Boutte, H Rousseau, ...
International Conference on Hybridization and Polyploidy (ICPHB-2016), 2016
52016
Impact of whole genome triplication on the evolutionary history and the functional dynamics of regulatory genes involved in Brassica self-incompatibility signalling pathway
T Azibi, H Hadj-Arab, M Lodé, JF de Carvalho, G Trotoux, S Nègre, ...
Plant reproduction 33 (1), 43-58, 2020
32020
The relative roles of local climate adaptation and phylogeny in determining leaf-out timing of temperate tree species
E Desnoues, JF de Carvalho, CM Zohner, TW Crowther
Forest Ecosystems 4 (1), 1-7, 2017
32017
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