| Overcoming the loss of blue sensitivity through opsin duplication in the largest animal group, beetles CR Sharkey, MS Fujimoto, NP Lord, S Shin, DD McKenna, A Suvorov, ... Scientific reports 7 (1), 1-10, 2017 | 22 | 2017 |
| Effects of error-correction of heterozygous next-generation sequencing data MS Fujimoto, PM Bodily, N Okuda, MJ Clement, Q Snell BMC bioinformatics 15 (7), S3, 2014 | 19 | 2014 |
| Detecting false positive sequence homology: a machine learning approach MS Fujimoto, A Suvorov, NO Jensen, MJ Clement, SM Bybee BMC bioinformatics 17 (1), 101, 2016 | 16 | 2016 |
| Opsins have evolved under the permanent heterozygote model: insights from phylotranscriptomics of Odonata A Suvorov, NO Jensen, CR Sharkey, MS Fujimoto, P Bodily, ... Molecular ecology 26 (5), 1306-1322, 2017 | 15 | 2017 |
| Heterozygous genome assembly via binary classification of homologous sequence PM Bodily, MS Fujimoto, C Ortega, N Okuda, JC Price, MJ Clement, ... BMC bioinformatics 16 (S7), S5, 2015 | 11 | 2015 |
| The OGCleaner: filtering false-positive homology clusters MS Fujimoto, A Suvorov, NO Jensen, MJ Clement, Q Snell, SM Bybee Bioinformatics 33 (1), 125-127, 2017 | 7 | 2017 |
| ScaffoldScaffolder: solving contig orientation via bidirected to directed graph reduction PM Bodily, MS Fujimoto, Q Snell, D Ventura, MJ Clement Bioinformatics 32 (1), 17-24, 2016 | 6 | 2016 |
| A novel approach for multi-SNP GWAS and its application in Alzheimer’s disease PM Bodily, MS Fujimoto, JT Page, MJ Clement, MTW Ebbert, PG Ridge BMC bioinformatics 17 (7), 455-463, 2016 | 5 | 2016 |
| Genome Polymorphism Detection Through Relaxed de Bruijn Graph Construction MS Fujimoto, C Lyman, A Suvorov, P Bodily, Q Snell, K Crandall, S Bybee, ... 2017 IEEE 17th International Conference on Bioinformatics and Bioengineering …, 2017 | 3 | 2017 |
| The Polygraph: A Data Structure for Genome Alignment and Variation Detection M Fujimoto, C Lyman, M Clement Proceedings of 11th International Conference on Bioinformatics and …, 2019 | 2 | 2019 |
| Whole Genome Phylogenetic Tree Reconstruction Using Colored de Bruijn Graphs CA Lyman, MS Fujimoto, A Suvorov, PM Bodily, Q Snell, KA Crandall, ... arXiv preprint arXiv:1709.00164, 2017 | 2 | 2017 |
| Application of a max-cut heuristic to the contig orientation problem in genome assembly P Bodily, MJ Clement, Q Snell, JC Price, S Fujimoto, N Okuda Proceedings of the International Conference on Bioinformatics, Computational …, 2013 | 2 | 2013 |
| GNUMAP 4.0: Space and Time Efficient NGS Read Mapping Using the FM-Index MS Fujimoto, CA Lyman, PM Bodily Insights Bioinform 1 (1), 1-8, 2018 | 1 | 2018 |
| Haplotype-centered mapping for improved alignments and genetic association studies PM Bodily, MJ Clement, Q Snell, MS Fujimoto, PG Ridge Proceedings of the 5th ACM Conference on Bioinformatics, Computational …, 2014 | 1 | 2014 |
| Graph-Based Whole Genome Phylogenomics MS Fujimoto | | 2020 |
| Kcollections: A Fast and Efficient Library for K-mers MS Fujimoto, CA Lyman, MJ Clement 2020 IEEE International Parallel and Distributed Processing Symposium …, 2020 | | 2020 |
| Deep ancestral introgression shapes evolutionary history of dragonflies and damselflies A Suvorov, C Scornavacca, MS Fujimoto, P Bodily, M Clement, ... bioRxiv, 2020 | | 2020 |
| The PepSeq Pipeline: Software for Antimicrobial Motif Discovery in Randomly-Generated Peptide Libraries TD Jensen, KA Bresciano, E Dallon, MS Fujimoto, CA Lyman, E Stewart, ... Proceedings of the 2018 ACM International Conference on Bioinformatics …, 2018 | | 2018 |
| PROCEEDINGS-2017 IEEE 17TH INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOENGINEERING, BIBE 2017 A Asaithambi, S Roy, S Turlapaty, N Ahmed, K Bertels, Z Al-Ars, ... Public health 508, 513, 2018 | | 2018 |
| Modeling Global and local Codon Bias with Deep Language Models MS Fujimoto, PM Bodily, CA Lyman, AJ Jacobsen, Q Snell, MJ Clement Bioinformatics and Bioengineering (BIBE), 2017 IEEE 17th International …, 2017 | | 2017 |
Mark ClementProfessor of Computer Science, Brigham Young UniversityVerified email at cs.byu.edu
