| Overcoming the loss of blue sensitivity through opsin duplication in the largest animal group, beetles CR Sharkey, MS Fujimoto, NP Lord, S Shin, DD McKenna, A Suvorov, ... Scientific Reports 7 (1), 8, 2017 | 87 | 2017 |
| Deep ancestral introgression shapes evolutionary history of dragonflies and damselflies A Suvorov, C Scornavacca, MS Fujimoto, P Bodily, M Clement, ... Systematic biology 71 (3), 526-546, 2022 | 36 | 2022 |
| Opsins have evolved under the permanent heterozygote model: insights from phylotranscriptomics of Odonata A Suvorov, NO Jensen, CR Sharkey, MS Fujimoto, P Bodily, ... Molecular ecology 26 (5), 1306-1322, 2017 | 35 | 2017 |
| Effects of error-correction of heterozygous next-generation sequencing data MS Fujimoto, PM Bodily, N Okuda, MJ Clement, Q Snell BMC bioinformatics 15 (7), S3, 2014 | 25 | 2014 |
| Detecting false positive sequence homology: a machine learning approach MS Fujimoto, A Suvorov, NO Jensen, MJ Clement, SM Bybee BMC bioinformatics 17, 1-11, 2016 | 23 | 2016 |
| A novel approach for multi-SNP GWAS and its application in Alzheimer’s disease PM Bodily, MS Fujimoto, JT Page, MJ Clement, MTW Ebbert, PG Ridge, ... BMC bioinformatics 17, 455-463, 2016 | 21 | 2016 |
| BART for post-correction of OCR newspaper text E Soper, S Fujimoto, YY Yu Proceedings of the Seventh Workshop on Noisy User-generated Text (W-NUT 2021 …, 2021 | 18 | 2021 |
| ScaffoldScaffolder: solving contig orientation via bidirected to directed graph reduction PM Bodily, MS Fujimoto, Q Snell, D Ventura, MJ Clement Bioinformatics 32 (1), 17-24, 2016 | 14 | 2016 |
| Heterozygous genome assembly via binary classification of homologous sequence PM Bodily, MS Fujimoto, C Ortega, N Okuda, JC Price, MJ Clement, ... BMC bioinformatics 16, 1-10, 2015 | 13 | 2015 |
| The OGCleaner: filtering false-positive homology clusters MS Fujimoto, A Suvorov, NO Jensen, MJ Clement, Q Snell, SM Bybee Bioinformatics 33 (1), 125-127, 2017 | 10 | 2017 |
| Whole Genome Phylogenetic Tree Reconstruction Using Colored de Bruijn Graphs CA Lyman, MS Fujimoto, A Suvorov, PM Bodily, Q Snell, KA Crandall, ... arXiv preprint arXiv:1709.00164, 2017 | 5 | 2017 |
| Active transfer learning for handwriting recognition E Burdett, S Fujimoto, T Brown, A Shurtz, D Segrera, L Sorenson, ... International Conference on Frontiers in Handwriting Recognition, 245-258, 2022 | 4 | 2022 |
| The PepSeq Pipeline: Software for antimicrobial motif discovery in randomly-generated peptide libraries TD Jensen, KA Bresciano, E Dallon, MS Fujimoto, CA Lyman, E Stewart, ... Proceedings of the 2018 ACM International Conference on Bioinformatics …, 2018 | 4 | 2018 |
| Modeling Global and local Codon Bias with Deep Language Models MS Fujimoto, PM Bodily, CA Lyman, AJ Jacobsen, Q Snell, MJ Clement Bioinformatics and Bioengineering (BIBE), 2017 IEEE 17th International …, 2017 | 4 | 2017 |
| Genome Polymorphism Detection Through Relaxed de Bruijn Graph Construction MS Fujimoto, C Lyman, A Suvorov, P Bodily, Q Snell, K Crandall, S Bybee, ... 2017 IEEE 17th International Conference on Bioinformatics and Bioengineering …, 2017 | 4 | 2017 |
| A structured approach to ensemble learning for Alzheimer's disease prediction M Seeley, M Clement, C Giraud-Carrier, Q Snell, P Bodily, S Fujimoto Proceedings of the 5th ACM Conference on Bioinformatics, Computational …, 2014 | 3 | 2014 |
| Kcollections: A fast and efficient library for k-mers MS Fujimoto, CA Lyman, MJ Clement 2020 IEEE International Parallel and Distributed Processing Symposium …, 2020 | 2 | 2020 |
| The Polygraph: A Data Structure for Genome Alignment and Variation Detection M Fujimoto, C Lyman, M Clement Proceedings of 11th International Conference on Bioinformatics and …, 2019 | 2 | 2019 |
| Learning the Language of Genes: Representing Global Codon Bias with Deep Language Models MS Fujimoto, PM Bodily, CA Lyman, JA Jacobsen, MJ Clement | 2 | 2017 |
| Automated Cause-of-Death Tagging from 1918 Ohio Death Records J Price, M Clement, S Fujimoto, J Merrell, S Rawlings, A Bay Available at SSRN 3781891, 2021 | 1 | 2021 |
Mark ClementProfessor of Computer Science, Brigham Young UniversityVerified email at cs.byu.edu
