José Miguel Ponciano
José Miguel Ponciano
University of Florida:
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Cited by
Cited by
Estimating density dependence, process noise, and observation error
B Dennis, JM Ponciano, SR Lele, ML Taper, DF Staples
Ecological Monographs 76 (3), 323-341, 2006
Stability of a promiscuous plasmid in different hosts: no guarantee for a long-term relationship
L De Gelder, JM Ponciano, P Joyce, EM Top
Microbiology 153 (2), 452-463, 2007
Adaptive plasmid evolution results in host-range expansion of a broad-host-range plasmid
L De Gelder, JJ Williams, JM Ponciano, M Sota, EM Top
Genetics 178 (4), 2179-2190, 2008
Compensatory mutations improve general permissiveness to antibiotic resistance plasmids
W Loftie-Eaton, K Bashford, H Quinn, K Dong, J Millstein, S Hunter, ...
Nature ecology & evolution 1 (9), 1354-1363, 2017
Evolutionary paths that expand plasmid host-range: implications for spread of antibiotic resistance
W Loftie-Eaton, H Yano, S Burleigh, RS Simmons, JM Hughes, ...
Molecular biology and evolution 33 (4), 885-897, 2016
Combining mathematical models and statistical methods to understand and predict the dynamics of antibiotic-sensitive mutants in a population of resistant bacteria during …
L De Gelder, JM Ponciano, Z Abdo, P Joyce, LJ Forney, EM Top
Genetics 168 (3), 1131-1144, 2004
Replicated sampling increases efficiency in monitoring biological populations
B Dennis, JM Ponciano, ML Taper
Ecology 91 (2), 610-620, 2010
Hierarchical models in ecology: confidence intervals, hypothesis testing, and model selection using data cloning
JM Ponciano, ML Taper, B Dennis, SR Lele
Ecology 90 (2), 356-362, 2009
The population biology of bacterial plasmids: a hidden Markov model approach
JM Ponciano, L De Gelder, EM Top, P Joyce
Genetics 176 (2), 957-968, 2007
Inherent variation in stable isotope values and discrimination factors in two life stages of green turtles
HB Vander Zanden, KA Bjorndal, W Mustin, JM Ponciano, AB Bolten
Physiological and Biochemical Zoology 85 (5), 431-441, 2012
First principles modeling of nonlinear incidence rates in seasonal epidemics
JM Ponciano, MA Capistrán
PLoS computational biology 7 (2), e1001079, 2011
Density‐dependent state‐space model for population‐abundance data with unequal time intervals
B Dennis, JM Ponciano
Ecology 95 (8), 2069-2076, 2014
Evidential statistics as a statistical modern synthesis to support 21st century science
ML Taper, JM Ponciano
Population Ecology 58 (1), 9-29, 2016
Evolution of Diversity in Spatially Structured Escherichia coli Populations
JM Ponciano, HJ La, P Joyce, LJ Forney
Applied and environmental microbiology 75 (19), 6047-6054, 2009
Assessing parameter identifiability in Phylogenetic models using Data Cloning
JM Ponciano, G Burleigh, E Braun, MLT Taper
Systematic Biology, 2012
The evolution of antibiotic susceptibility and resistance during the formation of Escherichia coli biofilms in the absence of antibiotics
JG Tyerman, JM Ponciano, P Joyce, LJ Forney, LJ Harmon
BMC evolutionary biology 13 (1), 1-7, 2013
Use of stochastic models to assess the effect of environmental factors on microbial growth
JM Ponciano, FPJ Vandecasteele, TF Hess, LJ Forney, RL Crawford, ...
Applied and Environmental Microbiology 71 (5), 2355-2364, 2005
Incorporating specific change points in catchability in fisheries stock assessment models: An alternative approach applied to the blue shark (Prionace glauca) stock in the …
F Carvalho, R Ahrens, D Murie, JM Ponciano, A Aires-da-Silva, ...
Fisheries Research 154, 135-146, 2014
Apparent survival estimation from continuous mark–recapture/resighting data
AB Barbour, JM Ponciano, K Lorenzen
Methods in Ecology and Evolution 4 (9), 846-853, 2013
Evaluating the role of genome downsizing and size thresholds from genome size distributions in angiosperms
R Zenil‐Ferguson, JM Ponciano, JG Burleigh
American Journal of Botany 103 (7), 1175-1186, 2016
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