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Peter Krusche
Peter Krusche
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Zitiert von
Jahr
Strelka2: fast and accurate calling of germline and somatic variants
S Kim, K Scheffler, AL Halpern, MA Bekritsky, E Noh, M Källberg, X Chen, ...
Nature methods 15 (8), 591-594, 2018
10262018
A reference data set of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree
MA Eberle, E Fritzilas, P Krusche, M Källberg, BL Moore, MA Bekritsky, ...
Genome research 27 (1), 157-164, 2017
3882017
Best practices for benchmarking germline small-variant calls in human genomes
P Krusche, L Trigg, PC Boutros, CE Mason, FM De La Vega, BL Moore, ...
Nature biotechnology 37 (5), 555-560, 2019
3092019
Phase locking and multiple oscillating attractors for the coupled mammalian clock and cell cycle
C Feillet, P Krusche, F Tamanini, RC Janssens, MJ Downey, P Martin, ...
Proceedings of the National Academy of Sciences 111 (27), 9828-9833, 2014
2232014
ExpansionHunter: a sequence-graph-based tool to analyze variation in short tandem repeat regions
E Dolzhenko, V Deshpande, F Schlesinger, P Krusche, R Petrovski, ...
Bioinformatics 35 (22), 4754-4756, 2019
2002019
Paragraph: a graph-based structural variant genotyper for short-read sequence data
S Chen, P Krusche, E Dolzhenko, RM Sherman, R Petrovski, ...
Genome biology 20, 1-13, 2019
1282019
Conserved noncoding sequences highlight shared components of regulatory networks in dicotyledonous plants
L Baxter, A Jironkin, R Hickman, J Moore, C Barrington, P Krusche, ...
The Plant Cell 24 (10), 3949-3965, 2012
832012
Cyclin-dependent kinase inhibitor p20 controls circadian cell-cycle timing
R Laranjeiro, TK Tamai, E Peyric, P Krusche, S Ott, D Whitmore
Proceedings of the National Academy of Sciences 110 (17), 6835-6840, 2013
682013
Evolutionary analysis of regulatory sequences (EARS) in plants
E Picot, P Krusche, A Tiskin, I Carré, S Ott
The Plant Journal 64 (1), 165-176, 2010
372010
Genomic plasticity and rapid host switching can promote the evolution of generalism: a case study in the zoonotic pathogen Campylobacter
DJ Woodcock, P Krusche, NJC Strachan, KJ Forbes, FM Cohan, G Méric, ...
Scientific Reports 7 (1), 9650, 2017
342017
Efficient longest common subsequence computation using bulk-synchronous parallelism
P Krusche, A Tiskin
International Conference on Computational Science and Its Applications, 165-174, 2006
292006
New algorithms for efficient parallel string comparison
P Krusche, A Tiskin
Proceedings of the twenty-second annual ACM symposium on Parallelism in …, 2010
272010
Advancing data science in drug development through an innovative computational framework for data sharing and statistical analysis
AM Mallon, DA Häring, F Dahlke, P Aarden, S Afyouni, D Delbarre, ...
BMC Medical Research Methodology 21, 1-11, 2021
142021
Experimental evaluation of BSP programming libraries
P Krusche
Parallel Processing Letters 18 (01), 7-21, 2008
132008
Parallel longest increasing subsequences in scalable time and memory
P Krusche, A Tiskin
International Conference on Parallel Processing and Applied Mathematics, 176-185, 2009
112009
Efficient parallel string comparison
P Krusche, A Tiskin
Proceedings of ParCo 38, 193-200, 2008
92008
Computing alignment plots efficiently
P Krusche, A Tiskin
Parallel Computing: From Multicores and GPU's to Petascale 19, 158-165, 2010
82010
Analysis of 5’gene regions reveals extraordinary conservation of novel non-coding sequences in a wide range of animals
NJ Davies, P Krusche, E Tauber, S Ott
BMC Evolutionary Biology 15, 1-13, 2015
72015
String comparison by transposition networks
P Krusche, A Tiskin
arXiv preprint arXiv:0903.3579, 2009
62009
Author Correction: Best practices for benchmarking germline small-variant calls in human genomes.
P Krusche, L Trigg, PC Boutros, CE Mason, FM De La Vega, BL Moore, ...
Nature Biotechnology 37 (5), 567-567, 2019
32019
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