|MicroRNA-184 inhibits neuroblastoma cell survival through targeting the serine/threonine kinase AKT2|
NH Foley, IM Bray, A Tivnan, K Bryan, DM Murphy, PG Buckley, J Ryan, ...
Molecular Cancer, 2010
|MicroRNAs 10a and 10b are potent inducers of neuroblastoma cell differentiation through targeting of nuclear receptor corepressor 2|
NH Foley, I Bray, KM Watters, S Das, K Bryan, T Bernas, JHM Prehn, ...
Cell Death & Differentiation 18 (7), 1089-1098, 2011
|MiRNA-335 Suppresses Neuroblastoma Cell Invasiveness By Direct Targeting of Multiple Genes from the non-Canonical TGF-β Signalling Pathway|
J Lynch, J Fay, M Meehan, K Bryan, KM Watters, DM Murphy, RL Stallings
|Widespread dysregulation of MiRNAs by MYCN amplification and chromosomal imbalances in neuroblastoma: association of miRNA expression with survival|
I Bray, K Bryan, S Prenter, PG Buckley, NH Foley, DM Murphy, L Alcock, ...
PLoS One 4 (11), e7850, 2009
|Application of simulated annealing to the biclustering of gene expression data|
K Bryan, P Cunningham, N Bolshakova
Information Technology in Biomedicine, IEEE Transactions on 10 (3), 519-525, 2006
|Biclustering of expression data using simulated annealing|
K Bryan, P Cunningham, N Bolshakova
Computer-Based Medical Systems, 2005. Proceedings. 18th IEEE Symposium on …, 2005
|MicroRNA-204 increases sensitivity of neuroblastoma cells to cisplatin and is associated with a favourable clinical outcome|
J Ryan, A Tivnan, J Fay, K Bryan, M Meehan, L Creevey, J Lynch, IM Bray, ...
British journal of cancer 107 (6), 967-976, 2012
|MiR‐137 functions as a tumor suppressor in neuroblastoma by downregulating KDM1A|
K Althoff, A Beckers, A Odersky, P Mestdagh, J Köster, IM Bray, K Bryan, ...
International journal of cancer 133 (5), 1064-1073, 2013
|Differential DNA methylation profiles of coding and non-coding genes define hippocampal sclerosis in human temporal lobe epilepsy|
SFC Miller-Delaney, K Bryan, S Das, RC McKiernan, IM Bray, ...
Brain 138 (3), 616-631, 2015
|MicroRNA mediates DNA demethylation events triggered by retinoic acid during neuroblastoma cell differentiation|
S Das, N Foley, K Bryan, KM Watters, I Bray, DM Murphy, PG Buckley, ...
Cancer research 70 (20), 7874-7881, 2010
|Unsupervised retrieval of attack profiles in collaborative recommender systems|
K Bryan, M O'Mahony, P Cunningham
Proceedings of the 2008 ACM conference on Recommender systems, 155-162, 2008
|MicroRNA-542-5p as a novel tumor suppressor in neuroblastoma|
I Bray, A Tivnan, K Bryan, NH Foley, KM Watters, L Tracey, AM Davidoff, ...
Cancer Letters 303 (1), 56-64, 2011
|Differential DNA methylation patterns define status epilepticus and epileptic tolerance|
SFC Miller-Delaney, S Das, T Sano, EM Jimenez-Mateos, K Bryan, ...
Journal of Neuroscience 32 (5), 1577-1588, 2012
|Modulation of neuroblastoma disease pathogenesis by an extensive network of epigenetically regulated microRNAs|
S Das, K Bryan, PG Buckley, O Piskareva, IM Bray, N Foley, J Ryan, ...
Oncogene 32 (24), 2927-2936, 2013
|miRNA expression profiling enables risk stratification in archived and fresh neuroblastoma tumor samples|
K De Preter, P Mestdagh, J Vermeulen, F Zeka, A Naranjo, I Bray, ...
Clinical Cancer Research, 2011
|Global MYCN transcription factor binding analysis in neuroblastoma reveals association with distinct E-box motifs and regions of DNA hypermethylation|
DM Murphy, PG Buckley, K Bryan, S Das, L Alcock, NH Foley, S Prenter, ...
PloS one 4 (12), e8154, 2009
|DyNet: visualization and analysis of dynamic molecular interaction networks|
IH Goenawan, K Bryan, DJ Lynn
Bioinformatics 32 (17), 2713-2715, 2016
|Chromosomal and MicroRNA Expression Patterns Reveal Biologically Distinct Subgroups of 11q- Neuroblastoma|
PG Buckley, L Alcock, K Bryan, I Bray, JH Schulte, A Schramm, A Eggert, ...
Clinical Cancer Research 16 (11), 2971, 2010
|miRNA profiles as a predictor of chemoresponsiveness in Wilms’ tumor blastema|
JA Watson, K Bryan, R Williams, S Popov, G Vujanic, A Coulomb, ...
PloS one 8 (1), e53417, 2013
|Genome‐wide DNA methylation analysis of neuroblastic tumors reveals clinically relevant epigenetic events and large‐scale epigenomic alterations localized to telomeric regions|
PG Buckley, S Das, K Bryan, KM Watters, L Alcock, J Koster, R Versteeg, ...
International Journal of Cancer 128 (10), 2296-2305, 2011