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Jian Zhan
Jian Zhan
Shenzhen Bay Laboratory
Verified email at szbl.ac.cn
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Cited by
Year
Digestive system is a potential route of COVID-19: an analysis of single-cell coexpression pattern of key proteins in viral entry process
H Zhang, Z Kang, H Gong, D Xu, J Wang, Z Li, Z Li, X Cui, J Xiao, J Zhan, ...
Gut 69 (6), 1010-1018, 2020
5142020
Real-time reliable determination of binding kinetics of DNA hybridization using a multi-channel graphene biosensor
S Xu, J Zhan, B Man, S Jiang, W Yue, S Gao, C Guo, H Liu, Z Li, J Wang, ...
Nature communications 8 (1), 14902, 2017
3952017
Community-wide assessment of protein-interface modeling suggests improvements to design methodology
SJ Fleishman, TA Whitehead, EM Strauch, JE Corn, S Qin, HX Zhou, ...
Journal of molecular biology 414 (2), 289-302, 2011
1562011
Energy functions in de novo protein design: current challenges and future prospects
Z Li, Y Yang, J Zhan, L Dai, Y Zhou
Annual review of biophysics 42, 315-335, 2013
1002013
A new size‐independent score for pairwise protein structure alignment and its application to structure classification and nucleic‐acid binding prediction
Y Yang, J Zhan, H Zhao, Y Zhou
PROTEINS: structure, Function, and Bioinformatics 80 (8), 2080-2088, 2012
912012
Direct prediction of profiles of sequences compatible with a protein structure by neural networks with fragment‐based local and energy‐based nonlocal profiles
Z Li, Y Yang, E Faraggi, J Zhan, Y Zhou
Proteins: Structure, Function, and Bioinformatics 82 (10), 2565-2573, 2014
742014
Develop reusable and combinable designs for transcriptional logic gates
J Zhan, B Ding, R Ma, X Ma, X Su, Y Zhao, Z Liu, J Wu, H Liu
Molecular systems biology 6 (1), 388, 2010
682010
Optimal secretion of alkali-tolerant xylanase in Bacillus subtilis by signal peptide screening
W Zhang, M Yang, Y Yang, J Zhan, Y Zhou, X Zhao
Applied Microbiology and Biotechnology 100, 8745-8756, 2016
502016
Repurposing clinically approved drugs for COVID-19 treatment targeting SARS-CoV-2 papain-like protease
Y Xu, K Chen, J Pan, Y Lei, D Zhang, L Fang, J Tang, X Chen, Y Ma, ...
International journal of biological macromolecules 188, 137-146, 2021
352021
Design and evaluation of a novel peptide–drug conjugate covalently targeting SARS-CoV-2 papain-like protease
N Liu, Y Zhang, Y Lei, R Wang, M Zhan, J Liu, Y An, Y Zhou, J Zhan, F Yin, ...
Journal of Medicinal Chemistry 65 (1), 876-884, 2022
342022
RNAcmap: a fully automatic pipeline for predicting contact maps of RNAs by evolutionary coupling analysis
T Zhang, J Singh, T Litfin, J Zhan, K Paliwal, Y Zhou
Bioinformatics 37 (20), 3494-3500, 2021
302021
Pairing a high-resolution statistical potential with a nucleobase-centric sampling algorithm for improving RNA model refinement
P Xiong, R Wu, J Zhan, Y Zhou
Nature communications 12 (1), 2777, 2021
282021
Genome-scale characterization of RNA tertiary structures and their functional impact by RNA solvent accessibility prediction
Y Yang, X Li, H Zhao, J Zhan, J Wang, Y Zhou
Rna 23 (1), 14-22, 2017
282017
SPOT‐Ligand: fast and effective structure‐based virtual screening by binding homology search according to ligand and receptor similarity
Y Yang, J Zhan, Y Zhou
Journal of Computational Chemistry 37 (18), 1734-1739, 2016
202016
Accurate inference of the full base-pairing structure of RNA by deep mutational scanning and covariation-induced deviation of activity
Z Zhang, P Xiong, T Zhang, J Wang, J Zhan, Y Zhou
Nucleic acids research 48 (3), 1451-1465, 2020
182020
Structural signatures of thermal adaptation of bacterial ribosomal RNA, transfer RNA, and messenger RNA
C Jegousse, Y Yang, J Zhan, J Wang, Y Zhou
PLoS One 12 (9), e0184722, 2017
172017
Probing RNA structures and functions by solvent accessibility: an overview from experimental and computational perspectives
M Solayman, T Litfin, J Singh, K Paliwal, Y Zhou, J Zhan
Briefings in Bioinformatics 23 (3), bbac112, 2022
162022
Investigation the possibility of using peptides with a helical repeating pattern of hydro-phobic and hydrophilic residues to inhibit IL-10
G Ni, S Chen, Y Yang, SF Cummins, J Zhan, Z Li, B Zhu, K Mounsey, ...
PloS one 11 (4), e0153939, 2016
152016
B‐factor profile prediction for RNA flexibility using support vector machines
I Guruge, G Taherzadeh, J Zhan, Y Zhou, Y Yang
Journal of Computational Chemistry 39 (8), 407-411, 2018
132018
YesU from Bacillus subtilis preferentially binds fucosylated glycans
J Tiralongo, O Cooper, T Litfin, Y Yang, R King, J Zhan, H Zhao, N Bovin, ...
Scientific reports 8 (1), 13139, 2018
122018
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