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Niko Popitsch
Niko Popitsch
Senior Bioinformatician, University of Vienna
Verified email at univie.ac.at - Homepage
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Cited by
Year
Factors influencing success of clinical genome sequencing across a broad spectrum of disorders
JC Taylor, HC Martin, S Lise, J Broxholme, JB Cazier, A Rimmer, ...
Nature genetics 47 (7), 717-726, 2015
4092015
The complete costs of genome sequencing: a microcosting study in cancer and rare diseases from a single center in the United Kingdom
K Schwarze, J Buchanan, JM Fermont, H Dreau, MW Tilley, JM Taylor, ...
Genetics in Medicine 22 (1), 85-94, 2020
2182020
Sequencing of human genomes with nanopore technology
R Bowden, RW Davies, A Heger, AT Pagnamenta, M de Cesare, ...
Nature communications 10 (1), 1869, 2019
2062019
Clinical whole-genome sequencing from routine formalin-fixed, paraffin-embedded specimens: pilot study for the 100,000 Genomes Project
P Robbe, N Popitsch, SJL Knight, P Antoniou, J Becq, M He, A Kanapin, ...
Genetics in Medicine 20 (10), 1196-1205, 2018
1482018
The Borrelia burgdorferi RelA/SpoT Homolog and Stringent Response Regulate Survival in the Tick Vector and Global Gene Expression during Starvation
D Drecktrah, M Lybecker, N Popitsch, P Rescheneder, LS Hall, ...
PLoS Pathogens 11 (9), e1005160, 2015
932015
Revisiting the coding potential of the E. coli genome through Hfq co-immunoprecipitation
I Bilusic, N Popitsch, P Rescheneder, R Schroeder, M Lybecker
RNA biology 11 (5), 641-654, 2014
852014
Mutations in PIGY: expanding the phenotype of inherited glycosylphosphatidylinositol deficiencies
B Ilkovski, AT Pagnamenta, GL O'Grady, T Kinoshita, MF Howard, M Lek, ...
Human molecular genetics 24 (21), 6146-6159, 2015
802015
Analysis of exome data for 4293 trios suggests GPI-anchor biogenesis defects are a rare cause of developmental disorders
AT Pagnamenta, Y Murakami, JM Taylor, C Anzilotti, MF Howard, V Miller, ...
European Journal of Human Genetics 25 (6), 669-679, 2017
752017
Genomic and transcriptomic correlates of Richter transformation in chronic lymphocytic leukemia
J Klintman, N Appleby, B Stamatopoulos, K Ridout, TA Eyre, P Robbe, ...
Blood, The Journal of the American Society of Hematology 137 (20), 2800-2816, 2021
722021
NGC: lossless and lossy compression of aligned high-throughput sequencing data
N Popitsch, A von Haeseler
Nucleic acids research 41 (1), e27-e27, 2013
712013
Germline recessive mutations in PI4KA are associated with perisylvian polymicrogyria, cerebellar hypoplasia and arthrogryposis
AT Pagnamenta, MF Howard, E Wisniewski, N Popitsch, SJL Knight, ...
Human Molecular Genetics 24 (13), 3732-3741, 2015
702015
In vivo expression technology and 5΄ end mapping of the Borrelia burgdorferi transcriptome identify novel RNAs expressed during mammalian infection
PP Adams, C Flores Avile, N Popitsch, I Bilusic, R Schroeder, M Lybecker, ...
Nucleic acids research 45 (2), 775-792, 2017
682017
Novel clinically relevant genes in gastrointestinal stromal tumors identified by exome sequencing
SF Schoppmann, U Vinatzer, N Popitsch, M Mittlböck, S Liebmann-Reindl, ...
Clinical Cancer Research 19 (19), 5329-5339, 2013
662013
DSNotify: handling broken links in the web of data
NP Popitsch, B Haslhofer
Proceedings of the 19th international conference on World wide web, 761-770, 2010
652010
DSNotify–a solution for event detection and link maintenance in dynamic datasets
N Popitsch, B Haslhofer
Journal of Web Semantics 9 (3), 266-283, 2011
632011
Impaired plasticity of macrophages in X-linked adrenoleukodystrophy
I Weinhofer, B Zierfuss, S Hametner, M Wagner, N Popitsch, C Machacek, ...
Brain 141 (8), 2329-2342, 2018
612018
Assessment of pre-analytical sample handling conditions for comprehensive liquid biopsy analysis
T Gerber, S Taschner-Mandl, L Saloberger-Sindhöringer, N Popitsch, ...
The Journal of Molecular Diagnostics 22 (8), 1070-1086, 2020
572020
Temperature-dependent sRNA transcriptome of the Lyme disease spirochete
N Popitsch, I Bilusic, P Rescheneder, R Schroeder, M Lybecker
BMC genomics 18, 1-14, 2017
502017
Natural RNA polymerase aptamers regulate transcription in E. coli
N Sedlyarova, P Rescheneder, A Magan, N Popitsch, N Rziha, I Bilusic, ...
Molecular cell 67 (1), 30-43. e6, 2017
492017
CD371 cell surface expression: a unique feature of DUX4-rearranged acute lymphoblastic leukemia
A Schumich, M Zaliova, K Fortschegger, K Nebral, A Attarbaschi, K Fiser, ...
Haematologica 104 (8), e352, 2019
462019
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