Andreas Dräger
Andreas Dräger
Junior Professor for Computational Systems Biology of Infection and Antimicrobial-Resistance
Verified email at - Homepage
Cited by
Cited by
BiGG Models: A platform for integrating, standardizing and sharing genome-scale models
ZA King, JS Lu, A Dräger, PC Miller, S Federowicz, JA Lerman, A Ebrahim, ...
Nucleic Acids Research, 2015
BioJava: an open-source framework for bioinformatics
RCG Holland, TA Down, M Pocock, A Prlić, D Huen, K James, S Foisy, ...
Bioinformatics 24 (18), 2096-2097, 2008
Recon3D enables a three-dimensional view of gene variation in human metabolism
E Brunk, S Sahoo, DC Zielinski, A Altunkaya, A Dräger, N Mih, F Gatto, ...
Nature biotechnology 36 (3), 272, 2018
Controlled vocabularies and semantics in systems biology
M Courtot, N Juty, C Knüpfer, D Waltemath, A Zhukova, A Dräger, ...
Molecular systems biology 7 (1), 543, 2011
Escher: a web application for building, sharing, and embedding data-rich visualizations of biological pathways
ZA King, A Dräger, A Ebrahim, N Sonnenschein, NE Lewis, BO Palsson
PLoS Comput Biol 11 (8), e1004321, 2015
Encyclopedia of systems biology
W Dubitzky, O Wolkenhauer, H Yokota, KH Cho
Springer Publishing Company, Incorporated, 2013
Path2Models: large-scale generation of computational models from biochemical pathway maps
F Büchel, N Rodriguez, N Swainston, C Wrzodek, T Czauderna, R Keller, ...
BMC systems biology 7 (1), 1-19, 2013
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools
C Chaouiya, D Bérenguier, SM Keating, A Naldi, MP Van Iersel, ...
BMC systems biology 7 (1), 1-15, 2013
MEMOTE for standardized genome-scale metabolic model testing
C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ...
Nature biotechnology 38 (3), 272-276, 2020
JSBML: a flexible Java library for working with SBML
A Dräger, N Rodriguez, M Dumousseau, A Dörr, C Wrzodek, N Le Novère, ...
Bioinformatics 27 (15), 2167-2168, 2011
Modeling metabolic networks in C. glutamicum: a comparison of rate laws in combination with various parameter optimization strategies
A Dräger, M Kronfeld, MJ Ziller, J Supper, H Planatscher, JB Magnus, ...
BMC Systems Biology 3 (1), 5, 2009
KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats
C Wrzodek, A Dräger, A Zell
Bioinformatics 27 (16), 2314-2315, 2011
SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks
A Dräger, N Hassis, J Supper, A Schröder, A Zell
BMC systems biology 2 (1), 39, 2008
COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms
M Ostaszewski, A Mazein, ME Gillespie, I Kuperstein, A Niarakis, ...
Scientific data 7 (1), 1-4, 2020
Precise generation of systems biology models from KEGG pathways
C Wrzodek, F Büchel, M Ruff, A Dräger, A Zell
BMC systems biology 7 (1), 1-12, 2013
Improving collaboration by standardization efforts in systems biology
A Dräger, BØ Palsson
Frontiers in bioengineering and biotechnology 2, 61, 2014
BiGG Models 2020: multi-strain genome-scale models and expansion across the phylogenetic tree
CJ Norsigian, N Pusarla, JL McConn, JT Yurkovich, A Dräger, BO Palsson, ...
Nucleic acids research 48 (D1), D402-D406, 2020
Do genome‐scale models need exact solvers or clearer standards?
A Ebrahim, E Almaas, E Bauer, A Bordbar, AP Burgard, RL Chang, ...
Molecular systems biology 11 (10), 831, 2015
Synthetic promoters capable of driving robust nuclear gene expression in the green alga Chlamydomonas reinhardtii
MA Scranton, JT Ostrand, DR Georgianna, SM Lofgren, D Li, RC Ellis, ...
Algal research 15, 135-142, 2016
ModuleMaster: A new tool to decipher transcriptional regulatory networks
C Wrzodek, A Schröder, A Dräger, D Wanke, KW Berendzen, M Kronfeld, ...
Biosystems 99 (1), 79-81, 2010
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