Andreas Dräger

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Citations	3579	2627
h-index	29	26
i10-index	44	41

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Andreas ZellProfessor für Informatik, Universität TübingenVerified email at uni-tuebingen.de
Bernhard PalssonUCSDVerified email at eng.ucsd.edu
Clemens WrzodekRoche Innovation Center Penzberg. Previously: Center for Bioinformatics, Tübingen, GermanyVerified email at germancafe.de
Michael HuckaCalifornia Institute of TechnologyVerified email at caltech.edu
Nicolas Le NovèreaSciStance LtdVerified email at ascistance.co.uk
Nicolas RodriguezSenior Software Systems and Database Architect, Babraham InstituteVerified email at babraham.ac.uk
Zachary A. KingDevOps Engineer, AmyrisVerified email at ucsd.edu
Jochen SupperVerified email at supper.de
Dr. Hannes PlanatscherSignatope GmbHVerified email at signatope.com
Daniel C. ZielinskiProject Scientist, University of California San DiegoVerified email at ucsd.edu
Nathan E LewisAssociate Professor, University of California, San DiegoVerified email at ucsd.edu
Roland KellerUniversität TübingenVerified email at uni-tuebingen.de
Andreas PrlicUCSD / SDSCVerified email at sdsc.edu
Ali EbrahimUniversity of California, San DiegoVerified email at ucsd.edu
Finja Wrzodek (geb. Büchel)Researcher at Center for Bioinformatics Tuebingen (ZBIT), University of Tuebingen, Tübingen, GermanyVerified email at uni-tuebingen.de
Nathan MihVerified email at eng.ucsd.edu
James YurkovichTranslational Research Fellow at the Institute for Systems BiologyVerified email at systemsbiology.org
Chris MyersUniversity of UtahVerified email at ece.utah.edu
Anand V SastryGraduate Student in Bioengineering, UC San DiegoVerified email at eng.ucsd.edu
Michael ZillerPrincipal Investigator, Max Planck Institute of PsychiatryVerified email at psych.mpg.de

Andreas Dräger

Junior Professor for Computational Systems Biology of Infection and Antimicrobial-Resistance

Verified email at informatik.uni-tuebingen.de - Homepage

systems biology bioinformatics computational biology software engineering biological modeling


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BiGG Models: A platform for integrating, standardizing and sharing genome-scale models ZA King, JS Lu, A Dräger, PC Miller, S Federowicz, JA Lerman, A Ebrahim, ... Nucleic Acids Research, 2015	515	2015
BioJava: an open-source framework for bioinformatics RCG Holland, TA Down, M Pocock, A Prlić, D Huen, K James, S Foisy, ... Bioinformatics 24 (18), 2096-2097, 2008	279	2008
Recon3D enables a three-dimensional view of gene variation in human metabolism E Brunk, S Sahoo, DC Zielinski, A Altunkaya, A Dräger, N Mih, F Gatto, ... Nature biotechnology 36 (3), 272, 2018	268	2018
Controlled vocabularies and semantics in systems biology M Courtot, N Juty, C Knüpfer, D Waltemath, A Zhukova, A Dräger, ... Molecular systems biology 7 (1), 543, 2011	259	2011
Escher: a web application for building, sharing, and embedding data-rich visualizations of biological pathways ZA King, A Dräger, A Ebrahim, N Sonnenschein, NE Lewis, BO Palsson PLoS Comput Biol 11 (8), e1004321, 2015	220	2015
Encyclopedia of systems biology W Dubitzky, O Wolkenhauer, H Yokota, KH Cho Springer Publishing Company, Incorporated, 2013	172	2013
Path2Models: large-scale generation of computational models from biochemical pathway maps F Büchel, N Rodriguez, N Swainston, C Wrzodek, T Czauderna, R Keller, ... BMC systems biology 7 (1), 1-19, 2013	140	2013
SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools C Chaouiya, D Bérenguier, SM Keating, A Naldi, MP Van Iersel, ... BMC systems biology 7 (1), 1-15, 2013	130	2013
MEMOTE for standardized genome-scale metabolic model testing C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... Nature biotechnology 38 (3), 272-276, 2020	124*	2020
JSBML: a flexible Java library for working with SBML A Dräger, N Rodriguez, M Dumousseau, A Dörr, C Wrzodek, N Le Novère, ... Bioinformatics 27 (15), 2167-2168, 2011	109	2011
Modeling metabolic networks in C. glutamicum: a comparison of rate laws in combination with various parameter optimization strategies A Dräger, M Kronfeld, MJ Ziller, J Supper, H Planatscher, JB Magnus, ... BMC Systems Biology 3 (1), 5, 2009	87	2009
KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats C Wrzodek, A Dräger, A Zell Bioinformatics 27 (16), 2314-2315, 2011	78	2011
SBMLsqueezer: a CellDesigner plug-in to generate kinetic rate equations for biochemical networks A Dräger, N Hassis, J Supper, A Schröder, A Zell BMC systems biology 2 (1), 39, 2008	75	2008
COVID-19 Disease Map, building a computational repository of SARS-CoV-2 virus-host interaction mechanisms M Ostaszewski, A Mazein, ME Gillespie, I Kuperstein, A Niarakis, ... Scientific data 7 (1), 1-4, 2020	69	2020
Precise generation of systems biology models from KEGG pathways C Wrzodek, F Büchel, M Ruff, A Dräger, A Zell BMC systems biology 7 (1), 1-12, 2013	65	2013
Improving collaboration by standardization efforts in systems biology A Dräger, BØ Palsson Frontiers in bioengineering and biotechnology 2, 61, 2014	52	2014
BiGG Models 2020: multi-strain genome-scale models and expansion across the phylogenetic tree CJ Norsigian, N Pusarla, JL McConn, JT Yurkovich, A Dräger, BO Palsson, ... Nucleic acids research 48 (D1), D402-D406, 2020	51	2020
Do genome‐scale models need exact solvers or clearer standards? A Ebrahim, E Almaas, E Bauer, A Bordbar, AP Burgard, RL Chang, ... Molecular systems biology 11 (10), 831, 2015	51	2015
Synthetic promoters capable of driving robust nuclear gene expression in the green alga Chlamydomonas reinhardtii MA Scranton, JT Ostrand, DR Georgianna, SM Lofgren, D Li, RC Ellis, ... Algal research 15, 135-142, 2016	50	2016
ModuleMaster: A new tool to decipher transcriptional regulatory networks C Wrzodek, A Schröder, A Dräger, D Wanke, KW Berendzen, M Kronfeld, ... Biosystems 99 (1), 79-81, 2010	47	2010

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