| Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution LDW Hillier, W Miller, E Birney, W Warren, RC Hardison, CP Ponting, ... Nature 432 (7018), 695-716, 2004 | 2778 | 2004 |
| Extensive gene traffic on the mammalian X chromosome JJ Emerson*, H Kaessmann*, E Betrán, M Long Science 303 (5657), 537-540, 2004 | 425 | 2004 |
| Population Genomics of Sub-Saharan Drosophila melanogaster: African Diversity and Non-African Admixture JE Pool, RB Corbett-Detig, RP Sugino, KA Stevens, CM Cardeno, ... PLoS genetics 8 (12), e1003080, 2012 | 336 | 2012 |
| Contiguous and accurate de novo assembly of metazoan genomes with modest long read coverage M Chakraborty*, JG Baldwin-Brown*, AD Long, JJ Emerson Nucleic Acids Research 44 (19), e147-e147, 2016 | 322 | 2016 |
| Comparative sex chromosome genomics in snakes: differentiation, evolutionary strata, and lack of global dosage compensation B Viçoso*, JJ Emerson*, Y Zektser, S Mahajan, D Bachtrog PLoS Biol 11 (8), e1001643, 2013 | 299 | 2013 |
| Natural selection shapes genome-wide patterns of copy-number polymorphism in Drosophila melanogaster JJ Emerson*, M Cardoso-Moreira*, JO Borevitz, M Long Science 320 (5883), 1629-1631, 2008 | 270 | 2008 |
| Natural selection on cis and trans regulation in yeasts JJ Emerson*, LC Hsieh*, HM Sung*, TY Wang*, CJ Huang, HHS Lu, ... Genome Research 20 (6), 826-836, 2010 | 179 | 2010 |
| Models and data on plant-enemy coevolution J Bergelson, G Dwyer, JJ Emerson Annual Review of Genetics 35 (1), 469-499, 2001 | 175 | 2001 |
| Hidden genetic variation shapes the structure of functional elements in Drosophila M Chakraborty, NW VanKuren, R Zhao, X Zhang, S Kalsow, JJ Emerson Nature Genetics 50 (1), 20-25, 2018 | 121 | 2018 |
| Efficient population modification gene-drive rescue system in the malaria mosquito Anopheles stephensi A Adolfi, VM Gantz, N Jasinskiene, HF Lee, K Hwang, G Terradas, ... Nature Communications 11 (1), 1-13, 2020 | 108 | 2020 |
| Structural variants exhibit widespread allelic heterogeneity and shape variation in complex traits M Chakraborty, JJ Emerson, SJ Macdonald, AD Long Nature Communications 10 (1), 1-11, 2019 | 90 | 2019 |
| Inheritance of gene expression level and selective constraints on trans-and cis-regulatory changes in yeast B Schaefke*, JJ Emerson*, TY Wang, MYJ Lu, LC Hsieh, WH Li Molecular Biology and Evolution 30 (9), 2121-2133, 2013 | 88 | 2013 |
| Rapid low-cost assembly of the Drosophila melanogaster reference genome using low-coverage, long-read sequencing EA Solares*, M Chakraborty*, DE Miller, S Kalsow, K Hall, AG Perera, ... G3: Genes, Genomes, Genetics 8 (10), 3143-3154, 2018 | 68 | 2018 |
| The genetic basis of evolutionary change in gene expression levels JJ Emerson, WH Li Philosophical Transactions of the Royal Society B: Biological Sciences 365 …, 2010 | 68 | 2010 |
| Evolutionary genomics of structural variation in Asian rice (Oryza sativa) domestication Y Kou*, Y Liao*, T Toivainen, Y Lv, X Tian, JJ Emerson, BS Gaut, Y Zhou Molecular Biology and Evolution 37 (12), 3507-3524, 2020 | 45 | 2020 |
| Evolution of genome structure in the Drosophila simulans species complex M Chakraborty*, CH Chang*, DE Khost, J Vedanayagam, JR Adrion, ... Genome research 31 (3), 380-396, 2021 | 43 | 2021 |
| Sex chromosomes and male functions: where do new genes go? E Betran, JJ Emerson, H Kaessmann, M Long Cell Cycle 3 (7), 871-873, 2004 | 38 | 2004 |
| Genetic, genomic, and functional analysis of the granule lattice proteins in Tetrahymena secretory granules AT Cowan*, GR Bowman*, KF Edwards, JJ Emerson, AP Turkewitz Molecular Biology of the Cell 16 (9), 4046-4060, 2005 | 37 | 2005 |
| Drosophila Duplication Hotspots Are Associated with Late-Replicating Regions of the Genome M Cardoso-Moreira, JJ Emerson, AG Clark, M Long PLoS genetics 7 (11), e1002340, 2011 | 34 | 2011 |
| Genetically distinct coelacanth population off the northern Tanzanian coast M Nikaido, T Sasaki, JJ Emerson, M Aibara, SI Mzighani, YL Budeba, ... Proceedings of the National Academy of Sciences 108 (44), 18009-18013, 2011 | 34 | 2011 |
Mahul ChakrabortyTexas A& M UniversityVerified email at tamu.edu
