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Frederic B. Bastian
Frederic B. Bastian
Associate Director, Evolutionary Bioinformatics Group, SIB Swiss Institute of Bioinformatics
Bestätigte E-Mail-Adresse bei sib.swiss - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Bgee: integrating and comparing heterogeneous transcriptome data among species
F Bastian, G Parmentier, J Roux, S Moretti, V Laudet, ...
Data Integration in the Life Sciences, 124-131, 2008
1982008
Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon
MA Haendel, JP Balhoff, FB Bastian, DC Blackburn, JA Blake, Y Bradford, ...
Journal of biomedical semantics 5 (1), 1-13, 2014
1092014
The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals
FB Bastian, J Roux, A Niknejad, A Comte, SS Fonseca Costa, ...
Nucleic Acids Research 49 (D1), D831-D847, 2021
522021
The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases
SIB Swiss Institute of Bioinformatics Members
Nucleic acids research 44 (D1), D27-D37, 2016
432016
Data Integration in the Life Sciences
F Bastian, G Parmentier, J Roux, S Moretti, V Laudet, ...
Lecture Notes in Computer Science, 124-131, 2008
422008
The Confidence Information Ontology: a step towards a standard for asserting confidence in annotations
FB Bastian, MC Chibucos, P Gaudet, M Giglio, GL Holliday, H Huang, ...
Database 2015, bav043, 2015
372015
BgeeDB, an R package for retrieval of curated expression datasets and for gene list expression localization enrichment tests
A Komljenovic, J Roux, J Wollbrett, M Robinson-Rechavi, FB Bastian
F1000Research 5, 2016
272016
OncoMX: A Knowledgebase for Exploring Cancer Biomarkers in the Context of Related Cancer and Healthy Data
HM Dingerdissen, F Bastian, K Vijay-Shanker, M Robinson-Rechavi, ...
JCO clinical cancer informatics 4, 210-220, 2020
232020
Homolonto: generating homology relationships by pairwise alignment of ontologies and application to vertebrate anatomy
G Parmentier, FB Bastian, M Robinson-Rechavi
Bioinformatics 26 (14), 1766-1771, 2010
202010
vHOG, a multispecies vertebrate ontology of homologous organs groups
A Niknejad, A Comte, G Parmentier, J Roux, FB Bastian, ...
Bioinformatics 28 (7), 1017-1020, 2012
182012
Fifteen years SIB Swiss Institute of Bioinformatics: life science databases, tools and support
H Stockinger, AM Altenhoff, K Arnold, A Bairoch, F Bastian, S Bergmann, ...
Nucleic acids research 42 (W1), W436-W441, 2014
162014
Recent advances in biocuration: Meeting Report from the fifth International Biocuration Conference
P Gaudet, C Arighi, F Bastian, A Bateman, JA Blake, MJ Cherry, ...
Database 2012, bas036, 2012
142012
Uncovering hidden duplicated content in public transcriptomics data
M Rosikiewicz, A Comte, A Niknejad, M Robinson-Rechavi, FB Bastian
Database 2013, bat010, 2013
112013
The Expression Comparison Tool in Bgee
M Robinson-Rechavi, VR Laval, FB Bastian, J Wollbrett, T Bgee
Phylogenetics in the Genomic Era, 2020
22020
Robust inference of expression state in bulk and single-cell RNA-Seq using curated intergenic regions
SSF Costa, M Rosikiewicz, J Roux, J Wollbrett, FB Bastian, ...
bioRxiv, 2022
2022
BgeeDB, an R package for retrieval of curated expression datasets and for gene list expression localization enrichment tests
A Komljenovic, J Roux, J Wollbrett, M Robinson-Rechavi, FB Bastian
F1000Research, 2018
2018
Analysis of gene expression patterns in animals
FB Bastian
Université de Lausanne, Faculté de biologie et médecine, 2011
2011
Generating Homology Relationships by Alignment of Anatomical Ontologies
FB Bastian, G Parmentier, M Robinson-Rechavi
ICBO, 35, 2009
2009
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