Matthew W. Hahn
Matthew W. Hahn
Distinguished Professor of Biology and Computer Science, Indiana University
Verified email at - Homepage
Cited by
Cited by
Evolution of genes and genomes on the Drosophila phylogeny
AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ...
Nature 450 (7167), 203-218, 2007
Evolutionary and biomedical insights from the rhesus macaque genome
RA Gibbs, J Rogers, MG Katze, R Bumgarner, GM Weinstock, ER Mardis, ...
Science 316 (5822), 222-234, 2007
The evolution of transcriptional regulation in eukaryotes
GA Wray, MW Hahn, E Abouheif, JP Balhoff, M Pizer, MV Rockman, ...
Molecular biology and evolution 20 (9), 1377-1419, 2003
CAFE: a computational tool for the study of gene family evolution
T De Bie, N Cristianini, JP Demuth, MW Hahn
Bioinformatics 22 (10), 1269-1271, 2006
Sex Determination: Why So Many Ways of Doing It?
D Bachtrog, JE Mank, CL Peichel, M Kirkpatrick, SP Otto, TL Ashman, ...
PLOS Biology 12 (7), e1001899, 2014
Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow
TE Cruickshank, MW Hahn
Molecular ecology 23 (13), 3133-3157, 2014
Genomic islands of speciation in Anopheles gambiae
TL Turner, MW Hahn, SV Nuzhdin
PLoS Biology 3 (9), e285, 2005
Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures
A Stark, MF Lin, P Kheradpour, JS Pedersen, L Parts, JW Carlson, ...
Nature 450 (7167), 219-232, 2007
Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans
DJ Begun, AK Holloway, K Stevens, LDW Hillier, YP Poh, MW Hahn, ...
PLoS Biology 5 (11), e310, 2007
Comparative genomics of centrality and essentiality in three eukaryotic protein-interaction networks
MW Hahn, AD Kern
Molecular biology and evolution 22 (4), 803-806, 2005
Comparative and demographic analysis of orang-utan genomes
DP Locke, LDW Hillier, WC Warren, KC Worley, LV Nazareth, DM Muzny, ...
Nature 469 (7331), 529-533, 2011
Random drift and culture change
RA Bentley, MW Hahn, SJ Shennan
Proceedings of the Royal Society of London B: Biological Sciences 271 (1547 …, 2004
Estimating gene gain and loss rates in the presence of error in genome assembly and annotation using CAFE 3
MV Han, GWC Thomas, J Lugo-Martinez, MW Hahn
Molecular biology and evolution 30 (8), 1987-1997, 2013
Highly evolvable malaria vectors: the genomes of 16 Anopheles mosquitoes
DE Neafsey, RM Waterhouse, MR Abai, SS Aganezov, MA Alekseyev, ...
Science 347 (6217), 1258522, 2015
Extensive introgression in a malaria vector species complex revealed by phylogenomics
MC Fontaine, JB Pease, A Steele, RM Waterhouse, DE Neafsey, ...
Science 347 (6217), 1258524, 2015
How reticulated are species?
J Mallet, N Besansky, MW Hahn
BioEssays 38 (2), 140-149, 2016
Gene family evolution across 12 Drosophila genomes
MW Hahn, MV Han, SG Han
PLoS genetics 3 (11), e197, 2007
Distinguishing among evolutionary models for the maintenance of gene duplicates
MW Hahn
Journal of Heredity 100 (5), 605-617, 2009
The evolution of mammalian gene families
JP Demuth, T De Bie, JE Stajich, N Cristianini, MW Hahn
PLoS One 1 (1), e85, 2006
Convergent evolution of the genomes of marine mammals
AD Foote, Y Liu, GWC Thomas, T Vinař, J Alföldi, J Deng, S Dugan, ...
Nature genetics 47 (3), 272-275, 2015
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