Kathleen Fisch, Ph.D.
Kathleen Fisch, Ph.D.
University of California, San Diego, School of Medicine Center for Computational Biology
Verified email at ucsd.edu - Homepage
Cited by
Cited by
Non-coding transcription instructs chromatin folding and compartmentalization to dictate enhancer-promoter communication and T cell fate
T Isoda, AJ Moore, Z He, V Chandra, M Aida, M Denholtz, ...
Cell 171 (1), 103-119. e18, 2017
Interaction landscape of inherited polymorphisms with somatic events in cancer
H Carter, R Marty, M Hofree, AM Gross, J Jensen, KM Fisch, X Wu, ...
Cancer discovery 7 (4), 410-423, 2017
Omics Pipe: a community-based framework for reproducible multi-omics data analysis
KM Fisch, T Meißner, L Gioia, JC Ducom, TM Carland, S Loguercio, AI Su
Bioinformatics 31 (11), 1724-1728, 2015
Identification of transcription factors responsible for dysregulated networks in human osteoarthritis cartilage by global gene expression analysis
KM Fisch, R Gamini, O Alvarez-Garcia, R Akagi, M Saito, Y Muramatsu, ...
Osteoarthritis and cartilage 26 (11), 1531-1538, 2018
Oxidative stress diverts tRNA synthetase to nucleus for protection against DNA damage
N Wei, Y Shi, LN Truong, KM Fisch, T Xu, E Gardiner, G Fu, YSO Hsu, ...
Molecular cell 56 (2), 323-332, 2014
Aquaculture methods for a genetically managed population of endangered Delta Smelt
JC Lindberg, G Tigan, L Ellison, T Rettinghouse, MM Nagel, KM Fisch
North American Journal of Aquaculture 75 (2), 186-196, 2013
A multiscale map of the stem cell state in pancreatic adenocarcinoma
NK Lytle, LP Ferguson, N Rajbhandari, K Gilroy, RG Fox, A Deshpande, ...
Cell 177 (3), 572-586. e22, 2019
Selective Whole-Genome Amplification Is a Robust Method That Enables Scalable Whole-Genome Sequencing of Plasmodium vivax from Unprocessed Clinical …
AN Cowell, DE Loy, SA Sundararaman, H Valdivia, K Fisch, AG Lescano, ...
MBio 8 (1), e02257-16, 2017
Dysregulated circadian rhythm pathway in human osteoarthritis: NR1D1 and BMAL1 suppression alters TGF-β signaling in chondrocytes
R Akagi, Y Akatsu, KM Fisch, O Alvarez-Garcia, T Teramura, Y Muramatsu, ...
Osteoarthritis and cartilage 25 (6), 943-951, 2017
Increased DNA methylation and reduced expression of transcription factors in human osteoarthritis cartilage
O Alvarez‐Garcia, KM Fisch, NE Wineinger, R Akagi, M Saito, T Sasho, ...
Arthritis & rheumatology 68 (8), 1876-1886, 2016
Suppression of REDD1 in osteoarthritis cartilage, a novel mechanism for dysregulated mTOR signaling and defective autophagy
O Alvarez-Garcia, M Olmer, R Akagi, Y Akasaki, KM Fisch, T Shen, AI Su, ...
Osteoarthritis and cartilage 24 (9), 1639-1647, 2016
Downregulation of 26S proteasome catalytic activity promotes epithelial-mesenchymal transition
A Banno, DA Garcia, ED van Baarsel, PJ Metz, K Fisch, CE Widjaja, ...
Oncotarget 7 (16), 21527, 2016
Evaluating the performance of captive breeding techniques for conservation hatcheries: a case study of the delta smelt captive breeding program
KM Fisch, JA Ivy, RS Burton, B May
Journal of heredity 104 (1), 92-104, 2013
Chromatin dysregulation and DNA methylation at transcription start sites associated with transcriptional repression in cancers
M Ando, Y Saito, G Xu, NQ Bui, K Medetgul-Ernar, M Pu, K Fisch, S Ren, ...
Nature communications 10 (1), 1-15, 2019
Variations in HPV function are associated with survival in squamous cell carcinoma
FO Gleber-Netto, X Rao, T Guo, Y Xi, M Gao, L Shen, K Erikson, NN Kalu, ...
JCI insight 4 (1), 2019
Fish hatchery genetic management techniques: integrating theory with implementation
KM Fisch, CC Kozfkay, JA Ivy, OA Ryder, RS Waples
North American Journal of Aquaculture 77 (3), 343-357, 2015
DNA methylation changes associated with Parkinson’s disease progression: outcomes from the first longitudinal genome-wide methylation analysis in blood
A Henderson-Smith, KM Fisch, J Hua, G Liu, E Ricciardelli, K Jepsen, ...
Epigenetics 14 (4), 365-382, 2019
Integrating gene and protein expression reveals perturbed functional networks in Alzheimer’s disease
S Canchi, B Raao, D Masliah, SB Rosenthal, R Sasik, KM Fisch, ...
Cell reports 28 (4), 1103-1116. e4, 2019
FAK activity sustains intrinsic and acquired ovarian cancer resistance to platinum chemotherapy
CJD Osterman, D Ozmadenci, EG Kleinschmidt, KN Taylor, AM Barrie, ...
Elife 8, e47327, 2019
Comprehensive Multi-omics Analysis Reveals Mitochondrial Stress as a Central Biological Hub for Spaceflight Impact
WA da Silveira, H Fazelinia, SB Rosenthal, EC Laiakis, MS Kim, ...
Cell 183 (5), 1185-1201. e20, 2020
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