Folgen
José L. McFaline-Figueroa
José L. McFaline-Figueroa
Assistant Professor of Biomedical Engineering, Columbia University
Bestätigte E-Mail-Adresse bei columbia.edu - Startseite
Titel
Zitiert von
Zitiert von
Jahr
Joint profiling of chromatin accessibility and gene expression in thousands of single cells
J Cao, DA Cusanovich, V Ramani, D Aghamirzaie, HA Pliner, AJ Hill, ...
Science 361 (6409), 1380-1385, 2018
8482018
Cicero predicts cis-regulatory DNA interactions from single-cell chromatin accessibility data
HA Pliner, JS Packer, JL McFaline-Figueroa, DA Cusanovich, RM Daza, ...
Molecular cell 71 (5), 858-871. e8, 2018
7052018
DNA damage induced by chronic inflammation contributes to colon carcinogenesis in mice
LB Meira, JM Bugni, SL Green, CW Lee, B Pang, D Borenshtein, ...
The Journal of clinical investigation 118 (7), 2516-2525, 2008
6872008
A genome-wide framework for mapping gene regulation via cellular genetic screens
M Gasperini, AJ Hill, JL McFaline-Figueroa, B Martin, S Kim, MD Zhang, ...
Cell 176 (1), 377-390. e19, 2019
5812019
Dynamics of Gene Expression in Single Root Cells of Arabidopsis thaliana
K Jean-Baptiste, JL McFaline-Figueroa, CM Alexandre, MW Dorrity, ...
The plant cell 31 (5), 993-1011, 2019
3472019
Massively multiplex chemical transcriptomics at single-cell resolution
SR Srivatsan, JL McFaline-Figueroa, V Ramani, L Saunders, J Cao, ...
Science 367 (6473), 45-51, 2020
3092020
Gut microbes define liver cancer risk in mice exposed to chemical and viral transgenic hepatocarcinogens
JG Fox, Y Feng, EJ Theve, AR Raczynski, JLA Fiala, AL Doernte, ...
Gut 59 (01), 88-97, 2010
2762010
Infection-induced colitis in mice causes dynamic and tissue-specific changes in stress response and DNA damage leading to colon cancer
A Mangerich, CG Knutson, NM Parry, S Muthupalani, W Ye, E Prestwich, ...
Proceedings of the National Academy of Sciences 109 (27), E1820-E1829, 2012
2732012
On the design of CRISPR-based single-cell molecular screens
AJ Hill, JL McFaline-Figueroa, LM Starita, MJ Gasperini, KA Matreyek, ...
Nature methods 15 (4), 271-274, 2018
2282018
Defects in purine nucleotide metabolism lead to substantial incorporation of xanthine and hypoxanthine into DNA and RNA
B Pang, JL McFaline, NE Burgis, M Dong, K Taghizadeh, MR Sullivan, ...
Proceedings of the National Academy of Sciences 109 (7), 2319-2324, 2012
2262012
Continuous elimination of oxidized nucleotides is necessary to prevent rapid onset of cellular senescence
P Rai, TT Onder, JJ Young, JL McFaline, B Pang, PC Dedon, ...
Proceedings of the National Academy of Sciences 106 (1), 169-174, 2009
2232009
Inferring causal gene regulatory networks from coupled single-cell expression dynamics using Scribe
X Qiu, A Rahimzamani, L Wang, B Ren, Q Mao, T Durham, ...
Cell systems 10 (3), 265-274. e11, 2020
181*2020
A pooled single-cell genetic screen identifies regulatory checkpoints in the continuum of the epithelial-to-mesenchymal transition
JL McFaline-Figueroa, AJ Hill, X Qiu, D Jackson, J Shendure, C Trapnell
Nature genetics 51 (9), 1389-1398, 2019
1672019
Quantification of DNA damage products resulting from deamination, oxidation and reaction with products of lipid peroxidation by liquid chromatography isotope dilution tandem …
K Taghizadeh, JL McFaline, B Pang, M Sullivan, M Dong, E Plummer, ...
Nature protocols 3 (8), 1287-1298, 2008
1592008
Predicting cellular responses to complex perturbations in high‐throughput screens
M Lotfollahi, A Klimovskaia Susmelj, C De Donno, L Hetzel, Y Ji, IL Ibarra, ...
Molecular systems biology 19 (6), e11517, 2023
1422023
Minor changes in expression of the mismatch repair protein MSH2 exert a major impact on glioblastoma response to temozolomide
JL McFaline-Figueroa, CJ Braun, M Stanciu, ZD Nagel, P Mazzucato, ...
Cancer research 75 (15), 3127-3138, 2015
1412015
Thyroid hormone regulates distinct paths to maturation in pigment cell lineages
LM Saunders, AK Mishra, AJ Aman, VM Lewis, MB Toomey, JS Packer, ...
Elife 8, e45181, 2019
1322019
Integrated molecular analysis indicates undetectable change in DNA damage in mice after continuous irradiation at~ 400-fold natural background radiation
W Olipitz, D Wiktor-Brown, J Shuga, B Pang, J McFaline, P Lonkar, ...
Environmental health perspectives 120 (8), 1130-1136, 2012
692012
Neural G0: a quiescent‐like state found in neuroepithelial‐derived cells and glioma
SA O’Connor, HM Feldman, S Arora, P Hoellerbauer, CM Toledo, ...
Molecular systems biology 17 (6), e9522, 2021
482021
Targeting TWIST 1 through loss of function inhibits tumorigenicity of human glioblastoma
AM Mikheev, SA Mikheeva, LJ Severs, CC Funk, L Huang, ...
Molecular oncology 12 (7), 1188-1202, 2018
352018
Das System kann den Vorgang jetzt nicht ausführen. Versuchen Sie es später erneut.
Artikel 1–20