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Yuansong Zeng
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Accurately clustering single-cell RNA-seq data by capturing structural relations between cells through graph convolutional network
Y Zeng, X Zhou, J Rao, Y Lu, Y Yang
2020 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2020
442020
Spatial transcriptomics prediction from histology jointly through transformer and graph neural networks
Y Zeng, Z Wei, W Yu, R Yin, Y Yuan, B Li, Z Tang, Y Lu, Y Yang
Briefings in Bioinformatics 23 (5), bbac297, 2022
342022
The design of an efficient swap mechanism for hybrid DRAM-NVM systems
X Chen, EHM Sha, W Jiang, Q Zhuge, J Chen, J Qin, Y Zeng
Proceedings of the 13th International Conference on Embedded Software, 1-10, 2016
202016
A robust and scalable graph neural network for accurate single-cell classification
Y Zeng, Z Wei, Z Pan, Y Lu, Y Yang
Briefings in Bioinformatics 23 (2), bbab570, 2022
182022
scAdapt: Virtual adversarial domain adaptation network for single cell RNA-seq data classification across platforms and species
X Zhou, H Chai, Y Zeng, H Zhao, CH Luo, Y Yang
Brief in bioinformatics, 2021
152021
Efficient wear leveling for inodes of file systems on persistent memories
X Chen, EHM Sha, Y Zeng, C Yang, W Jiang, Q Zhuge
2018 Design, Automation & Test in Europe Conference & Exhibition (DATE …, 2018
82018
Identifying spatial domain by adapting transcriptomics with histology through contrastive learning
Y Zeng, R Yin, M Luo, J Chen, Z Pan, Y Lu, W Yu, Y Yang
Briefings in Bioinformatics 24 (2), bbad048, 2023
72023
Identifying B-cell epitopes using AlphaFold2 predicted structures and pretrained language model
Y Zeng, Z Wei, Q Yuan, S Chen, W Yu, Y Lu, J Gao, Y Yang
Bioinformatics, 2022.12. 06.519221, 2022
72022
A Parameter-free Deep Embedded Clustering Method for Single-cell RNA-seq Data
Y Zeng, Z Wei, F Zhong, Z Pan, Y Lu, Y Yang
Brief in bioinformatics, 2021
72021
A Meta-learning based Graph-Hierarchical Clustering Method for Single Cell RNA-Seq Data
Z Pan, Y Lin, H Zhang, Y Zeng, W Yu, Y Yang
2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2022
12022
Graph convolutional network-based method for clustering single-cell RNA-seq data
Y Zeng, J Lin, X Zhou, Y Lu, Y Yang
bioRxiv, 278804, 2021
12021
An efficient file system for hybrid in-memory nvm and block devices
Y Zeng, EHM Sha, Q Zhuge, X Chen, Z Ma, L Wu
2018 IEEE 7th Non-Volatile Memory Systems and Applications Symposium (NVMSA …, 2018
12018
Deciphering cell types by integrating scATAC-seq data with genome sequences
Y Zeng, M Luo, N Shangguan, P Shi, J Feng, J Xu, K Chen, Y Lu, W Yu, ...
Nature Computational Science, 1-14, 2024
2024
SCdenoise: a reference-based scRNA-seq denoising method using semi-supervised learning
F Zhong, Y Zeng, Y Liu, Y Yang
2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2022
2022
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Articles 1–14