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Kathryn Dempsey Cooper
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Year
CD4+ regulatory and effector/memory T cell subsets profile motor dysfunction in Parkinson’s disease
JAH Saunders, KA Estes, LM Kosloski, HE Allen, KM Dempsey, ...
Journal of Neuroimmune Pharmacology 7, 927-938, 2012
3092012
A parallel graph sampling algorithm for analyzing gene correlation networks
K Dempsey, K Duraisamy, H Ali, S Bhowmick
Procedia Computer Science 4, 136-145, 2011
332011
A network-based compartmental model for the spread of whooping cough in Nebraska
K Ameri, KD Cooper
AMIA Summits on Translational Science Proceedings 2019, 388, 2019
192019
The development of parallel adaptive sampling algorithms for analyzing biological networks
K Dempsey, K Duraisamy, S Bhowmick, H Ali
2012 IEEE 26th International Parallel and Distributed Processing Symposium …, 2012
192012
A noise reducing sampling approach for uncovering critical properties in large scale biological networks
K Duraisamy, K Dempsey, H Ali, S Bhowmick
2011 International Conference on High Performance Computing & Simulation …, 2011
192011
Identifying aging-related genes in mouse hippocampus using gateway nodes
KM Dempsey, HH Ali
BMC systems biology 8, 1-16, 2014
162014
Identifying modular function via edge annotation in gene correlation networks using Gene Ontology search
K Dempsey, I Thapa, D Bastola, H Ali
2011 ieee international conference on bioinformatics and biomedicine …, 2011
162011
A novel correlation networks approach for the identification of gene targets
K Dempsey, S Bonasera, D Bastola, H Ali
2011 44th Hawaii International Conference on System Sciences, 1-8, 2011
152011
On the discovery of cellular subsystems in gene correlation networks using measures of centrality
KM Dempsey, HH Ali
Current Bioinformatics 8 (3), 305-314, 2013
142013
MTAP: the motif tool assessment platform
D Quest, K Dempsey, M Shafiullah, D Bastola, H Ali
BMC bioinformatics 9, 1-21, 2008
142008
Function-preserving filters for sampling in biological networks
K Dempsey, S Bhowmick, H Ali
Procedia Computer Science 9, 587-595, 2012
132012
Evaluation of essential genes in correlation networks using measures of centrality
K Dempsey, H Ali
2011 IEEE International Conference on Bioinformatics and Biomedicine …, 2011
122011
On mining biological signals using correlation networks
K Dempsey, I Thapa, C Cortes, Z Eriksen, DK Bastola, H Ali
2013 IEEE 13th International Conference on Data Mining Workshops, 327-334, 2013
102013
The ingredient co-occurrence network of packaged foods distributed in the United States
KM Cooper
Journal of Food Composition and Analysis 86, 103391, 2020
92020
Functional identification in correlation networks using gene ontology edge annotation
K Dempsey, I Thapa, D Bastola, H Ali
International journal of computational biology and drug design 5 (3-4), 222-244, 2012
92012
An intelligent data-centric approach toward identification of conserved motifs in protein sequences
K Dempsey, B Currall, R Hallworth, H Ali
Proceedings of the First ACM International Conference on Bioinformatics and …, 2010
82010
A parallel architecture for regulatory motif algorithm assessment
D Quest, K Dempsey, M Shafiullah, D Bastola, H Ali
2008 IEEE International Symposium on Parallel and Distributed Processing, 1-8, 2008
82008
The utility of electronic health record-based hygiene notes for chlorhexidine bathing practice evaluation
V Kettelhut, T Van Schooneveld, J McClay, A Fruhling, K Dempsey
Journal of Infection Prevention 18 (2), 72-77, 2017
72017
Forecasting the spread of mosquito-borne disease using publicly accessible data: a case study in Chikungunya
KM Cooper, DR Bastola, R Gandhi, D Ghersi, S Hinrichs, M Morien, ...
AMIA Annual Symposium Proceedings 2016, 431, 2016
72016
A new approach for sequence analysis: Illustrating an expanded bioinformatics view through exploring properties of the prestin protein
K Dempsey, B Currall, R Hallworth, H Ali
Handbook of Research on Computational and Systems Biology: Interdisciplinary …, 2011
72011
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Articles 1–20