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Marc Hoeppner
Marc Hoeppner
Head of NGS and bioinformatics at State Laboratory Schleswig-Holstein, Germany
Verified email at lsh.landsh.de
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Year
Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs
BA Curtis, G Tanifuji, F Burki, A Gruber, M Irimia, S Maruyama, MC Arias, ...
Nature 492 (7427), 59-65, 2012
4162012
Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax)
S Lamichhaney, G Fan, F Widemo, U Gunnarsson, DS Thalmann, ...
Nature genetics 48 (1), 84-88, 2016
3962016
Longitudinal multi-omics analyses identify responses of megakaryocytes, erythroid cells, and plasmablasts as hallmarks of severe COVID-19
JP Bernardes, N Mishra, F Tran, T Bahmer, L Best, JI Blase, D Bordoni, ...
Immunity 53 (6), 1296-1314. e9, 2020
2952020
Dense sampling of bird diversity increases power of comparative genomics
S Feng, J Stiller, Y Deng, J Armstrong, QI Fang, AH Reeve, D Xie, G Chen, ...
Nature 587 (7833), 252-257, 2020
2942020
Opportunities and challenges of whole-genome and-exome sequencing
BS Petersen, B Fredrich, MP Hoeppner, D Ellinghaus, A Franke
BMC genetics 18, 1-13, 2017
2542017
An improved canine genome and a comprehensive catalogue of coding genes and non-coding transcripts
MP Hoeppner, A Lundquist, M Pirun, JRS Meadows, N Zamani, ...
PloS one 9 (3), e91172, 2014
2422014
Specificity of the innate immune system and diversity of C-type lectin domain (CTLD) proteins in the nematode Caenorhabditis elegans
H Schulenburg, MP Hoeppner, J Weiner III, E Bornberg-Bauer
Immunobiology 213 (3-4), 237-250, 2008
2182008
Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms
P Rausch, M Rühlemann, BM Hermes, S Doms, T Dagan, K Dierking, ...
Microbiome 7, 1-19, 2019
1902019
A comprehensive, cell specific microRNA catalogue of human peripheral blood
S Juzenas, G Venkatesh, M Hübenthal, MP Hoeppner, ZG Du, M Paulsen, ...
Nucleic acids research 45 (16), 9290-9301, 2017
1812017
The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing
A Martinez Barrio, S Lamichhaney, G Fan, N Rafati, M Pettersson, ...
elife 5, e12081, 2016
1802016
Coordinated Changes in Gene Expression Throughout Encystation of Giardia intestinalis
E Einarsson, K Troell, MP Hoeppner, M Grabherr, U Ribacke, SG Svärd
PLoS neglected tropical diseases 10 (3), e0004571, 2016
972016
Transcriptomics of colour patterning and coloration shifts in crows
JW Poelstra, N Vijay, MP Hoeppner, JBW Wolf
Molecular ecology 24 (18), 4617-4628, 2015
892015
Two different epigenetic information channels in wild three-spined sticklebacks are involved in salinity adaptation
MJ Heckwolf, BS Meyer, R Häsler, MP Höppner, C Eizaguirre, ...
Science advances 6 (12), eaaz1138, 2020
822020
The functional repertoire contained within the native microbiota of the model nematode Caenorhabditis elegans
J Zimmermann, N Obeng, W Yang, B Pees, C Petersen, S Waschina, ...
The ISME journal 14 (1), 26-38, 2020
792020
Functional and evolutionary genomic inferences in Populus through genome and population sequencing of American and European aspen
YC Lin, J Wang, N Delhomme, B Schiffthaler, G Sundström, A Zuccolo, ...
Proceedings of the National Academy of Sciences 115 (46), E10970-E10978, 2018
762018
A comparison of pedigree, genetic and genomic estimates of relatedness for informing pairing decisions in two critically endangered birds: Implications for conservation …
SJ Galla, R Moraga, L Brown, S Cleland, MP Hoeppner, RF Maloney, ...
Evolutionary Applications 13 (5), 991-1008, 2020
742020
Unsupervised genome-wide recognition of local relationship patterns
N Zamani, P Russell, H Lantz, MP Hoeppner, JRS Meadows, N Vijay, ...
BMC genomics 14, 1-11, 2013
732013
Microbiomarkers in inflammatory bowel diseases: caveats come with caviar
F Sommer, MC Rühlemann, C Bang, M Höppner, A Rehman, C Kaleta, ...
Gut 66 (10), 1734-1738, 2017
722017
Large-scale sequencing identifies multiple genes and rare variants associated with Crohn’s disease susceptibility
A Sazonovs, CR Stevens, GR Venkataraman, K Yuan, B Avila, MT Abreu, ...
Nature genetics 54 (9), 1275-1283, 2022
712022
Reference genomes from distantly related species can be used for discovery of single nucleotide polymorphisms to inform conservation management
SJ Galla, NJ Forsdick, L Brown, MP Hoeppner, M Knapp, RF Maloney, ...
Genes 10 (1), 9, 2018
712018
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