Mathangi Thiagarajan
Mathangi Thiagarajan
Project Director, Frederick National Lab for Cancer Research
Bestätigte E-Mail-Adresse bei nih.gov
Titel
Zitiert von
Zitiert von
Jahr
Structure, function and diversity of the healthy human microbiome
C Huttenhower, D Gevers, R Knight, S Abubucker, JH Badger, ...
nature 486 (7402), 207, 2012
66962012
TM4: a free, open-source system for microarray data management and analysis
AI Saeed, V Sharov, J White, J Li, W Liang, N Bhagabati, J Braisted, ...
Biotechniques 34 (2), 374-378, 2003
49802003
[9] TM4 microarray software suite
AI Saeed, NK Bhagabati, JC Braisted, W Liang, V Sharov, EA Howe, J Li, ...
Methods in enzymology 411, 134-193, 2006
17182006
A framework for human microbiome research
BA Methé, KE Nelson, M Pop, HH Creasy, MG Giglio, C Huttenhower, ...
nature 486 (7402), 215, 2012
16292012
Metabolic reconstruction for metagenomic data and its application to the human microbiome
S Abubucker, N Segata, J Goll, AM Schubert, J Izard, BL Cantarel, ...
PLoS Comput Biol 8 (6), e1002358, 2012
9092012
Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote
JA Eisen, RS Coyne, M Wu, D Wu, M Thiagarajan, JR Wortman, ...
PLoS Biol 4 (9), e286, 2006
7342006
Genomic insights into the Ixodes scapularis tick vector of Lyme disease
Nature communications 7 (10507), 2016
3292016
Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton
ML Cuvelier, AE Allen, A Monier, JP McCrow, M Messié, SG Tringe, ...
Proceedings of the National Academy of Sciences 107 (33), 14679-14684, 2010
2532010
Proteogenomic Analysis of Human Colon Cancer Reveals New Therapeutic Opportunities.
Cell, 2019
1552019
Functional tradeoffs underpin salinity-driven divergence in microbial community composition
CL Dupont, J Larsson, S Yooseph, K Ininbergs, J Goll, ...
PloS one 9 (2), e89549, 2014
1422014
METAREP: JCVI metagenomics reports—an open source tool for high-performance comparative metagenomics
J Goll, DB Rusch, DM Tanenbaum, M Thiagarajan, K Li, BA Methé, ...
Bioinformatics 26 (20), 2631-2632, 2010
1322010
Metagenomic exploration of viruses throughout the Indian Ocean
SJ Williamson, LZ Allen, HA Lorenzi, DW Fadrosh, D Brami, ...
PloS one 7 (10), e42047, 2012
1052012
Comparative genomic analysis and phylogenetic position of Theileria equi
LS Kappmeyer, M Thiagarajan, DR Herndon, JD Ramsay, E Caler, ...
BMC genomics 13 (1), 1-13, 2012
1012012
Integrated proteogenomic characterization of clear cell renal cell carcinoma
DJ Clark, SM Dhanasekaran, F Petralia, J Pan, X Song, Y Hu, ...
Cell 179 (4), 964-983. e31, 2019
992019
A metagenomic framework for the study of airborne microbial communities
S Yooseph, C Andrews-Pfannkoch, A Tenney, J McQuaid, S Williamson, ...
PloS one 8 (12), e81862, 2013
972013
Influence of nutrients and currents on the genomic composition of microbes across an upwelling mosaic
LZ Allen, EE Allen, JH Badger, JP McCrow, IT Paulsen, LDH Elbourne, ...
The ISME journal 6 (7), 1403-1414, 2012
952012
Refined annotation and assembly of the Tetrahymena thermophila genome sequence through EST analysis, comparative genomic hybridization, and targeted gap closure
RS Coyne, M Thiagarajan, KM Jones, JR Wortman, LJ Tallon, BJ Haas, ...
Bmc Genomics 9 (1), 1-18, 2008
942008
The JCVI standard operating procedure for annotating prokaryotic metagenomic shotgun sequencing data
DM Tanenbaum, J Goll, S Murphy, P Kumar, N Zafar, M Thiagarajan, ...
Standards in genomic sciences 2 (2), 229-237, 2010
762010
Proteogenomic characterization of endometrial carcinoma
Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ...
Cell 180 (4), 729-748. e26, 2020
602020
Genome wide survey, discovery and evolution of repetitive elements in three Entamoeba species
H Lorenzi, M Thiagarajan, B Haas, J Wortman, N Hall, E Caler
BMC genomics 9 (1), 1-15, 2008
532008
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