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Richard Sandstrom
Richard Sandstrom
Altius Institute for Biomedical Research
Verified email at altius.org
Title
Cited by
Cited by
Year
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
168302012
Comprehensive mapping of long-range interactions reveals folding principles of the human genome
E Lieberman-Aiden, NL Van Berkum, L Williams, M Imakaev, T Ragoczy, ...
science 326 (5950), 289-293, 2009
87212009
Integrative analysis of 111 reference human epigenomes
A Kundaje, W Meuleman, J Ernst, M Bilenky, A Yen, A Heravi-Moussavi, ...
Nature 518 (7539), 317-330, 2015
61342015
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
60502007
Systematic localization of common disease-associated variation in regulatory DNA
MT Maurano, R Humbert, E Rynes, RE Thurman, E Haugen, H Wang, ...
Science 337 (6099), 1190-1195, 2012
39012012
Genetic effects on gene expression across human tissues
GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ...
Nature 550 (7675), 204-213, 2017
33702017
The accessible chromatin landscape of the human genome
RE Thurman, E Rynes, R Humbert, J Vierstra, MT Maurano, E Haugen, ...
Nature 489 (7414), 75-82, 2012
30952012
A comparative encyclopedia of DNA elements in the mouse genome
F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ...
Nature 515 (7527), 355-364, 2014
19302014
Comprehensive analysis of the chromatin landscape in Drosophila melanogaster
PV Kharchenko, AA Alekseyenko, YB Schwartz, A Minoda, NC Riddle, ...
Nature 471 (7339), 480-485, 2011
9842011
An expansive human regulatory lexicon encoded in transcription factor footprints
S Neph, J Vierstra, AB Stergachis, AP Reynolds, E Haugen, B Vernot, ...
Nature 489 (7414), 83-90, 2012
9562012
BEDOPS: high-performance genomic feature operations
S Neph, MS Kuehn, AP Reynolds, E Haugen, RE Thurman, AK Johnson, ...
Bioinformatics 28 (14), 1919-1920, 2012
9182012
Resolving the complexity of the human genome using single-molecule sequencing
MJP Chaisson, J Huddleston, MY Dennis, PH Sudmant, M Malig, ...
Nature 517 (7536), 608-611, 2015
8592015
Global mapping of protein-DNA interactions in vivo by digital genomic footprinting
JR Hesselberth, X Chen, Z Zhang, PJ Sabo, R Sandstrom, AP Reynolds, ...
Nature methods 6 (4), 283-289, 2009
7322009
A user's guide to the encyclopedia of DNA elements (ENCODE)
RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ...
PLoS biology 9 (4), 2011
6762011
Widespread plasticity in CTCF occupancy linked to DNA methylation
H Wang, MT Maurano, H Qu, KE Varley, J Gertz, F Pauli, K Lee, ...
Genome research 22 (9), 1680-1688, 2012
6622012
Sequencing newly replicated DNA reveals widespread plasticity in human replication timing
RS Hansen, S Thomas, R Sandstrom, TK Canfield, RE Thurman, ...
Proceedings of the National Academy of Sciences 107 (1), 139-144, 2010
6162010
Cell-of-origin chromatin organization shapes the mutational landscape of cancer
P Polak, R Karlić, A Koren, R Thurman, R Sandstrom, MS Lawrence, ...
Nature 518 (7539), 360-364, 2015
5892015
Dynamic landscape and regulation of RNA editing in mammals
MH Tan, Q Li, R Shanmugam, R Piskol, J Kohler, AN Young, KI Liu, ...
Nature 550 (7675), 249-254, 2017
5502017
Circuitry and dynamics of human transcription factor regulatory networks
S Neph, AB Stergachis, A Reynolds, R Sandstrom, E Borenstein, ...
Cell 150 (6), 1274-1286, 2012
5332012
Foxp3 exploits a pre-existent enhancer landscape for regulatory T cell lineage specification
RM Samstein, A Arvey, SZ Josefowicz, X Peng, A Reynolds, R Sandstrom, ...
Cell 151 (1), 153-166, 2012
5122012
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