| AdapterRemoval v2: rapid adapter trimming, identification, and read merging M Schubert, S Lindgreen, L Orlando BMC research notes 9, 1-7, 2016 | 1731 | 2016 |
| mapDamage2. 0: fast approximate Bayesian estimates of ancient DNA damage parameters H Jónsson, A Ginolhac, M Schubert, PLF Johnson, L Orlando Bioinformatics 29 (13), 1682-1684, 2013 | 1536 | 2013 |
| Comparative genomics reveals insights into avian genome evolution and adaptation G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz, A Antunes, ... Science 346 (6215), 1311-1320, 2014 | 1097 | 2014 |
| Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse L Orlando, A Ginolhac, G Zhang, D Froese, A Albrechtsen, M Stiller, ... Nature 499 (7456), 74-78, 2013 | 1031 | 2013 |
| Early divergent strains of Yersinia pestis in Eurasia 5,000 years ago S Rasmussen, ME Allentoft, K Nielsen, L Orlando, M Sikora, KG Sjögren, ... Cell 163 (3), 571-582, 2015 | 673 | 2015 |
| Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX M Schubert, L Ermini, C Der Sarkissian, H Jónsson, A Ginolhac, ... Nature Protocols 9 (5), 1056-1082, 2014 | 529 | 2014 |
| Ancient genomes revisit the ancestry of domestic and Przewalski’s horses C Gaunitz, A Fages, K Hanghřj, A Albrechtsen, N Khan, M Schubert, ... Science 360 (6384), 111-114, 2018 | 408 | 2018 |
| Improving ancient DNA read mapping against modern reference genomes M Schubert, A Ginolhac, S Lindgreen, JF Thompson, KAS Al-Rasheid, ... BMC genomics 13 (1), 178, 2012 | 365 | 2012 |
| Prehistoric genomes reveal the genetic foundation and cost of horse domestication M Schubert, H Jónsson, D Chang, C Der Sarkissian, L Ermini, A Ginolhac, ... Proceedings of the National Academy of Sciences 111 (52), E5661-E5669, 2014 | 358 | 2014 |
| Ancient genomic changes associated with domestication of the horse P Librado, C Gamba, C Gaunitz, C Der Sarkissian, M Pruvost, ... Science 356 (6336), 442-445, 2017 | 263 | 2017 |
| Speciation with gene flow in equids despite extensive chromosomal plasticity H Jónsson, M Schubert, A Seguin-Orlando, A Ginolhac, L Petersen, ... Proceedings of the National Academy of Sciences 111 (52), 18655-18660, 2014 | 244 | 2014 |
| Evolutionary genomics and conservation of the endangered Przewalski’s horse C Der Sarkissian, L Ermini, M Schubert, MA Yang, P Librado, M Fumagalli, ... Current Biology 25 (19), 2577-2583, 2015 | 235 | 2015 |
| Tracking the origins of Yakutian horses and the genetic basis for their fast adaptation to subarctic environments P Librado, C Der Sarkissian, L Ermini, M Schubert, H Jónsson, ... Proceedings of the National Academy of Sciences 112 (50), E6889-E6897, 2015 | 196 | 2015 |
| Ancient genomics C Der Sarkissian, ME Allentoft, MC Ávila-Arcos, R Barnett, PF Campos, ... Philosophical Transactions of the Royal Society B: Biological Sciences 370 …, 2015 | 163 | 2015 |
| Developing a 670k genotyping array to tag~ 2M SNPs across 24 horse breeds RJ Schaefer, M Schubert, E Bailey, DL Bannasch, E Barrey, GK Bar-Gal, ... BMC genomics 18 (1), 565, 2017 | 125 | 2017 |
| The evolutionary origin and genetic makeup of domestic horses P Librado, A Fages, C Gaunitz, M Leonardi, S Wagner, N Khan, ... Genetics 204 (2), 423-434, 2016 | 121 | 2016 |
| Evolutionary patterns and processes: lessons from ancient DNA M Leonardi, P Librado, C Der Sarkissian, M Schubert, AH Alfarhan, ... Systematic Biology 66 (1), e1-e29, 2017 | 117 | 2017 |
| Regulatory mutations in TBX3 disrupt asymmetric hair pigmentation that underlies Dun camouflage color in horses F Imsland, K McGowan, CJ Rubin, C Henegar, E Sundström, J Berglund, ... Nature genetics 48 (2), 152-158, 2016 | 106 | 2016 |
| Ligation bias in illumina next-generation DNA libraries: implications for sequencing ancient genomes A Seguin-Orlando, M Schubert, J Clary, J Stagegaard, MT Alberdi, ... PloS one 8 (10), e78575, 2013 | 93 | 2013 |
| High‐throughput DNA sequencing of ancient wood S Wagner, F Lagane, A Seguin‐Orlando, M Schubert, T Leroy, ... Molecular ecology 27 (5), 1138-1154, 2018 | 92 | 2018 |
Ludovic OrlandoCentre for Anthropobiology & Genomics of Toulouse, CNRS/Univ Paul SabatierVerified email at univ-tlse3.fr
