Freek T. Bakker
Freek T. Bakker
Assistant Professor, Biosystematics Group, Wageningen University
Verified email at wur.nl
Title
Cited by
Cited by
Year
Phylogenetic analysis of Phytophthora species based on mitochondrial and nuclear DNA sequences
L Kroon, FT Bakker, GBM Van Den Bosch, PJM Bonants, WG Flier
Fungal Genetics and Biology 41 (8), 766-782, 2004
4702004
Molecular phylogenetics, temporal diversification, and principles of evolution in the mustard family (Brassicaceae)
TLP Couvreur, A Franzke, IA Al-Shehbaz, FT Bakker, MA Koch, ...
Molecular Biology and Evolution 27 (1), 55-71, 2010
3472010
Exploring genetic variation in the tomato (Solanum section Lycopersicon) clade by whole‐genome sequencing
100 Tomato Genome Sequencing Consortium, S Aflitos, E Schijlen, ...
The Plant Journal 80 (1), 136-148, 2014
3092014
How to open the treasure chest? Optimising DNA extraction from herbarium specimens
T Särkinen, M Staats, JE Richardson, RS Cowan, FT Bakker
Public Library of Science 7 (8), e43808, 2012
2262012
Origin and diversification of the Greater Cape flora: ancient species repository, hot-bed of recent radiation, or both?
GA Verboom, JK Archibald, FT Bakker, DU Bellstedt, F Conrad, LL Dreyer, ...
Molecular Phylogenetics and Evolution 51 (1), 44-53, 2009
2112009
Phylogeny, function, and evolution of the cupins, a structurally conserved, functionally diverse superfamily of proteins
S Khuri, FT Bakker, JM Dunwell
Molecular Biology and Evolution 18 (4), 593-605, 2001
1812001
DNA barcoding of recently diverged species: relative performance of matching methods
R van Velzen, E Weitschek, G Felici, FT Bakker
PloS one 7 (1), e30490, 2012
1692012
Chloroplast phylogeny of asplenioid ferns based on rbcL and trnL-F spacer sequences (Polypodiidae, Aspleniaceae) and its implications for biogeography
H Schneider, SJ Russell, CJ Cox, F Bakker, S Henderson, F Rumsey, ...
Systematic Botany 29 (2), 260-274, 2004
1662004
Genomic treasure troves: complete genome sequencing of herbarium and insect museum specimens
M Staats, RHJ Erkens, B van de Vossenberg, JJ Wieringa, K Kraaijeveld, ...
PloS one 8 (7), e69189, 2013
1652013
DNA damage in plant herbarium tissue
M Staats, A Cuenca, JE Richardson, R Vrielink-van Ginkel, G Petersen, ...
PLoS one 6 (12), e28448, 2011
1552011
Evolution of nuclear rDNA its sequences in the Cladophora albida/sericea clade (Chlorophyta)
FT Bakker, JL Olsen, WT Stam
Journal of Molecular Evolution 40 (6), 640-651, 1995
1361995
Reconstructing patterns of reticulate evolution in angiosperms: what can we do?
B Vriesendorp, FT Bakker
Taxon 54 (3), 593-604, 2005
1322005
NUCLEAR RIBOSOMAL DNA INTERNAL TRANSCRIBED SPACER REGIONS (ITS1 AND ITS2) DEFINE DISCRETE BIOGEOGRAPHIC GROUPS IN CLADOPHORA ALBIDA (CHLOROPHYTA) 1
FT Bakker, JL Olsen, WT Stam, C van den Hoek
Journal of Phycology 28 (6), 839-845, 1992
1141992
Herbarium genomics: plastome sequence assembly from a range of herbarium specimens using an Iterative Organelle Genome Assembly pipeline
FT Bakker, D Lei, J Yu, S Mohammadin, Z Wei, S van de Kerke, ...
Biological Journal of the Linnean Society 117 (1), 33-43, 2016
1112016
Patterns of Nucleotide Substitution in Angiosperm cpDNA trnL (UAA)–trnF (GAA) Regions
FT Bakker, A Culham, R Gomez-Martinez*, J Carvalho, J Compton, ...
Molecular Biology and Evolution 17 (8), 1146-1155, 2000
1112000
Positive selection in phytotoxic protein-encoding genes of Botrytis species
M Staats, P van Baarlen, A Schouten, JAL van Kan, FT Bakker
Fungal Genetics and Biology 44 (1), 52-63, 2007
1042007
Phylogeny of Pelargonium (Geraniaceae) based on DNA sequences from three genomes
FT Bakker, A Culham, P Hettiarachi, T Touloumenidou, M Gibby
Taxon 53 (1), 17-31, 2004
1032004
Phylogeny, morphological evolution, and speciation of endemic Brassicaceae genera in the Cape flora of southern Africa
K Mummenhoff, IA Al-Shehbaz, FT Bakker, HP Linder, A Mühlhausen
Annals of the Missouri Botanical Garden, 400-424, 2005
942005
Biomass partitioning and root morphology of savanna trees across a water gradient
KW Tomlinson, FJ Sterck, F Bongers, DA da Silva, ERM Barbosa, D Ward, ...
Journal of Ecology 100 (5), 1113-1121, 2012
932012
The cladophora complex (Chlorophyta): new views based on 185 rRNA gene sequences
FT Bakker, JL Olsen, WT Stam, C Van Den Hoek
Molecular phylogenetics and evolution 3 (4), 365-382, 1994
931994
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