Current cancer driver variant predictors learn to recognize driver genes instead of functional variants D Raimondi, A Passemiers, P Fariselli, Y Moreau BMC biology 19, 1-12, 2021 | 17 | 2021 |
Fast and accurate inference of gene regulatory networks through robust precision matrix estimation A Passemiers, Y Moreau, D Raimondi Bioinformatics 38 (10), 2802-2809, 2022 | 8 | 2022 |
Large sample size and nonlinear sparse models outline epistatic effects in inflammatory bowel disease N Verplaetse, A Passemiers, A Arany, Y Moreau, D Raimondi Genome Biology 24 (1), 224, 2023 | 1 | 2023 |
How good neural networks interpretation methods really are? a quantitative benchmark A Passemiers, P Folco, D Raimondi, G Birolo, Y Moreau, P Fariselli arXiv preprint arXiv:2304.02383, 2023 | 1 | 2023 |
Gene regulatory network analysis identifies MYL1, MDH2, GLS, and TRIM28 as the principal proteins in the response of mesenchymal stem cells to Mg2+ ions J Nourisa, A Passemiers, F Shakeri, M Omidi, H Helmholz, D Raimondi, ... Computational and Structural Biotechnology Journal, 2024 | | 2024 |
Alleviating cell-free DNA sequencing biases with optimal transport A Passemiers, T Jatsenko, A Vanderstichele, P Busschaert, A Coosemans, ... bioRxiv, 2024.04. 04.588204, 2024 | | 2024 |
MetDecode: a novel methylation-based method for cell-free DNA tissue-of-origin assignment S Tuveri, D Sudhakaran, A Passemiers, T Jatsenko, D Raimondi, F Amant, ... EUROPEAN JOURNAL OF HUMAN GENETICS 32, 611-611, 2024 | | 2024 |
MetDecode: methylation-based deconvolution of cell-free DNA for non-invasive multi-cancer typing D Sudhakaran, S Tuveri, A Passemiers, T Jatsenko, T Laga, K Punie, ... medRxiv, 2023.12. 29.23300371, 2023 | | 2023 |